Ipomoea nil (Japanese morning glory): 109179684
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Entry
109179684 CDS
T04663
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109179684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109179684
Spliceosome [BR:
ini03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109179684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
109179684
NCBI-ProteinID:
XP_019184716
LinkDB
All DBs
Position
Un
AA seq
490 aa
AA seq
DB search
MADSFLADLDELSMADSFLADLDELSDNEADILDAEHMEEDVDGELNYDDLDSVSKLQRT
QRYINIMQKVEEALEKGCENSETVMVLEDDDPVYQLIVDCNALSVDIENEIIIIHNFIRD
KYRSKFPELESIVHQPIDYARVVKKIGNEMDLTLVDLKGILPPPDIMIVSVTASTTNGNP
LPEDVLQKTIEASCDAFALDSAKKKLLDFVKSQMGYIAPNLSAMVGSGVAAKLMGIAGGL
SSLAKMPACNVQLLGSKKSNLAGFSTPKFRIGFLEETEIFQSTPPSLRTRACRPLAAKAT
LAARVDSTRGDPTGKTGRSLLEEFRKKIKKWKELPPAKRPRPLPVPYSEPKRKRGGCRRR
KMKERYATTDMQKLANRMQFGVAEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLGAKV
AKKFKKNYGSRSGLSSSLGFTPVQGIELWNPEAYVNQLGSGTQSTYFSETGTFSKIKRTK
RYFQKKQFEQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctttcttagcagatttggatgaattatctatggcggattctttcttagca
gatttggatgaattatctgacaatgaagctgatattctcgatgctgagcacatggaggaa
gatgttgatggtgagcttaactatgatgatctggatagtgtctctaaattgcagaggacc
cagcgttacatcaatattatgcagaaagtagaagaagccctagaaaagggttgtgaaaac
tcagaaacagtgatggttctagaagatgatgatccggtgtaccagctgattgtagattgt
aatgcattgtcagttgatattgagaatgaaattattataattcataatttcatacgtgat
aagtaccgctcaaaattcccagagttggagtctattgttcaccaaccaattgactatgcc
cgggtggttaagaaaattgggaatgagatggacctcacccttgttgatctgaaaggaatt
ttgcctccacctgatatcatgattgtttcggttacagcatcaactacaaatggcaaccca
ctgcctgaagatgtgttgcagaagacaattgaagcttcttgtgatgcatttgctcttgat
tcagcaaagaagaaactcctagatttcgttaagagtcaaatggggtatattgctccaaac
ctctcagctatggtaggaagtggtgttgctgcaaaacttatggggattgctggtggtctt
tcctcattggcaaagatgcctgcttgtaatgtgcagcttcttggctctaaaaagagcaac
cttgctgggttctctacaccaaaatttcgcattggattccttgaggagacagaaatattt
cagagcacacctccttctttaaggacgcgtgcctgtcgacccttagctgcaaaggctact
cttgctgcacgtgttgattcaacaaggggagacccaacggggaaaactgggcggtctctc
ctagaagagtttcgtaagaagataaagaaatggaaagagctacctcctgccaaacggcct
agaccacttcctgttccatattctgaacctaaaagaaagaggggtggatgtagacggagg
aagatgaaagaaaggtatgccactacagacatgcagaagctggctaacagaatgcagttt
ggagtagctgaagagagctcattgggggatggtttgggtgagggatatggaatgcttggt
caggctggaagtggcaaattacgtgtatctgttgggcagagcaagcttggtgccaaagta
gctaagaaatttaagaagaattacggaagcagatcaggactgagttcaagtttaggcttc
actcctgtgcaggggattgaactgtggaacccagaagcatatgtaaatcaacttgggtca
ggaacccagagcacatacttttcagaaaccgggacattttccaagatcaagagaacaaaa
cgctactttcagaagaaacaatttgaacaatga
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