Ipomoea nil (Japanese morning glory): 109179895
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Entry
109179895 CDS
T04663
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109179895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109179895
03036 Chromosome and associated proteins [BR:
ini03036
]
109179895
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109179895
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109179895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
109179895
NCBI-ProteinID:
XP_019184919
LinkDB
All DBs
Position
Un
AA seq
719 aa
AA seq
DB search
MPGMATDSSDLAMVPVPPESENPVVVYPLRHGLKPPIHRASISWARGNTLRVTLLRKPAP
DDAGGGDSEAGGKVVELNLSNTGGEEIDAVRWRKIAYGSVTPFALLQSRKNSMAALSKMS
LDSPPYNAEWSEHVMEYSKEINSLLGNPKSAPTSVIEDPKAVLKEVEEPTCLKGAWELME
MFYADKQSQAWISERLLDWLADYDSLFSGTHPTVHSKVVDFQKDLVALQTIENDPKYWEV
LSSALAVGWLDTVVKLLRLHGSYQFDQLGTRETENGLVEAVAVLITKMPRMRTTLPAGKL
GECYPSKQNFMKAWERWRAQITKLECSAYWLQCDHLQTREGLKNMLQIMLGNASVLSNAT
CHWMELYVSHFLYIRPFTVGLENMYNLARKCMQIKPVSSSHKLMNLVLGIFGENAEVVLA
ECSRSFGPWMMAHAVELLTAGSTQAELLLHEEQPKLGGINLEELHRLAYAEVLSSHVLTW
QIAPIYLTSCMKLGISLLENLLYKQPVQQHQVLLKSIEICRLYELNTVSSNIMRIAGVHH
WKHGKKGSAVFWLQQARDEVRLNRIAKQLFDFVGKSVSDEGFKQWEGLIELLGSESRTAS
GLEFLNKYRDFRRCLLQVEGDTSTDAAGKAAVALISLMKNPSTPQQFWLPLLHDSLKLLN
WREHPLFNVSQTNLLLNKMQELSMARLRPDFVENDLPSEALSSVRLALATNLGRAILEE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcatggcgacggattccagcgacctagcaatggtccctgttccgcccgaatcc
gaaaacccggttgtggtctaccccctccgccacggccttaaacccccaattcaccgcgcc
tcgatctcctgggcgcgcgggaacactctccgcgtcacactcctccggaagccggccccc
gacgatgctggaggcggagacagcgaggctggcggaaaggtggtggagttgaaccttagc
aacactggtggtgaagagatcgatgccgtgaggtggaggaaaatcgcctacggttcagtg
actcccttcgcacttcttcagagtcggaagaactccatggctgcgttgtcgaagatgtcg
ttggattctccaccctacaatgctgagtggtcagagcatgttatggagtacagcaaagaa
ataaattctctcctcggtaatccaaagtcagctcctacttcagtcattgaagatccaaaa
gcagtcttaaaggaagttgaggagcccacttgtttgaaaggtgcatgggagctaatggag
atgttttatgctgacaagcaatcccaagcttggatctcagaacggcttcttgattggttg
gctgactatgattctttattctctggaacccacccaactgtccattcgaaagttgtggat
tttcagaaagatcttgttgctttacagaccattgaaaatgatcccaagtactgggaggtt
ttatcatcagcgttggcagttggctggttagatacagttgtaaaactgttacgtttgcat
ggatcttatcagtttgaccagctaggaactcgtgagacagagaatggactggtggaagct
gttgctgttcttataacaaaaatgcccagaatgcgtactactctaccagcagggaaactg
ggtgaatgttacccctccaagcaaaactttatgaaggcatgggaaagatggcgagcacaa
ataacaaagttggagtgcagtgcatactggcttcaatgtgatcaccttcagactagggaa
ggacttaaaaatatgctgcagattatgttggggaatgctagtgttctatcaaatgcaaca
tgtcattggatggagctttatgtttctcactttctatatatccggcctttcacagtgggt
ttagaaaacatgtacaatcttgctcggaagtgcatgcagataaagccagtttccagttcc
cacaagttgatgaaccttgtacttgggatttttggagaaaatgcagaggttgttttagct
gaatgttcaagatcgtttggtccctggatgatggcacatgctgtagagctgttaacagct
gggagcactcaagctgaacttcttttgcatgaagagcagcctaaacttggaggaatcaac
ttagaagagctccatcgacttgcttatgcagaagttctatcatctcatgtgctgacatgg
cagatcgcaccaatttatctgacatcatgtatgaagcttggaatcagcttgttggaaaat
ctattgtacaaacagcctgtacaacagcaccaagttctactaaagagcattgagatctgt
cgtctgtatgaacttaacactgtctcttcaaacattatgaggattgctggagtccaccac
tggaaacatggaaagaaaggctctgcagttttctggcttcagcaagctcgtgatgaagtt
cgtttaaacagaattgcgaagcaattatttgattttgttggaaagtctgtctctgatgaa
ggtttcaagcaatgggaaggactaattgaattgctgggttcagagtccaggactgcgagt
ggtcttgagtttttgaacaagtatagggatttcaggcgatgccttctgcaggttgaaggt
gatacatctactgatgctgctgggaaagctgctgtggcccttatatcactgatgaaaaac
ccttctacacctcaacaattttggcttcctcttctgcatgattcgctaaaattgctaaac
tggcgggagcatcctttgtttaatgtctctcagaccaacttgcttttgaataaaatgcaa
gagttgtctatggcaagattgcgaccagattttgtagaaaatgacttgccatctgaagct
ttgagttctgtcagactggctcttgctactaacttgggacgtgcaatccttgaggaatga
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