Ipomoea nil (Japanese morning glory): 109179910
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Entry
109179910 CDS
T04663
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109179910
Transcription machinery [BR:
ini03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
109179910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
109179910
NCBI-ProteinID:
XP_019184937
LinkDB
All DBs
Position
Un
AA seq
555 aa
AA seq
DB search
MGFRLHLRWGLSTHPQIFSFRSSSSWPSSTSLKGREILYDSVGTSPSFMHWENEASHTDP
FRVRTCLSDRQLRENEISVTAEMEIGVGSHSSLYDVIGNNREVLTEEDKLKFLKSSKGKQ
FSLLMKNLDLLENIFADSCVVGLERDILAQLERLGALELFNTFLSRGQKSFPFSDLTNRP
TELVHETQENDLLNIHMNKIVVTSGKKQERELRRRKRSDTNSDVFTLHLQPKTSKLESKY
PNISSGKTWRNFRNTREKIASSEAEMSKGVKVVAELESIRTILEEETGRVASFSSWAEAA
GLSQKVLQQRLHYGWYCRDELLRSTKSLIVYLARNYRGLGVSFEDLVQVGSFGVLQGAVR
FDHTRGYQFSTYVQYWIKKSMSMLVALHARGIRVPFTIIKVIKKIQKAKKALSSRHGKFP
SESEIAKFTGLSTNRIVLASKCLRVVGSIDQKLGDFMSAKFVECTPDKSVISPEEAVIRQ
HKINNVYSLLKGLEPKERDILVLRFGLVNNQRKSLEEIGRLHGVSKEWIRRVESRALTKL
RNKSSLQDLRYFLHS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggttttaggctgcacctgagatggggtctctcaactcaccctcaaattttctctttc
agatcatcatcttcttggccttcttcaacttcattaaagggaagggagattttatatgac
tcggttggaacttctccgtcttttatgcactgggagaatgaagcttcacatactgatcct
ttcagagtgaggacttgtttatctgaccgacagctccgggaaaatgaaatctcagtaact
gcagaaatggaaattggcgtaggatctcacagtagcttatacgatgtgatcggaaacaac
agggaggtgttaaccgaggaggacaaattaaaattccttaaatcaagcaaaggaaaacag
tttagtttacttatgaaaaatcttgatcttttggaaaacatttttgccgattcatgtgtg
gttggacttgaaagagatattctggcacaacttgagaggctcggagctctggaattattc
aatacttttctctcgaggggtcaaaaatcttttcccttttctgatttgacaaacaggcca
actgagcttgttcacgaaactcaggagaacgacctcctgaatattcacatgaataagatc
gttgttacctcggggaaaaagcaggaaagagagttgagaagaaggaaacggtccgatact
aatagtgatgtttttacactacatctgcagccaaaaacatccaaattggagtcaaaatac
ccaaatatttcttctggaaaaacatggcgaaattttagaaatactagagagaaaattgct
agcagtgaagcagaaatgtcaaagggtgttaaggtggttgcagaactcgaaagtatcagg
acaattctggaagaagaaaccggcagagtagctagttttagtagctgggcagaagctgct
ggactgagccaaaaggtattgcagcagcgtttgcattatggctggtattgcagagatgaa
cttcttagaagtacaaagtcgttaatcgtatatcttgctagaaactacagaggactcgga
gtctcatttgaagatctagttcaggttggcagtttcggtgtcctacaaggtgcagtgaga
tttgaccacaccagggggtaccaattctcaacatatgtccagtattggattaagaaatca
atgtccatgttggtagcactccatgctagagggattcgcgttcctttcacaataattaaa
gtcatcaaaaaaattcaaaaagctaaaaaggctctgagtagccgccatggtaagtttccg
agtgagagtgaaattgccaagttcaccggtctatctaccaacagaattgtgttagctagc
aaatgtctgagagttgtggggtcgatcgatcagaaactgggagattttatgagtgccaaa
tttgtggagtgtacaccggacaaatctgtgatcagtccagaagaagctgttataaggcag
cacaagattaacaacgtttattctcttctaaaaggcctggagcccaaagagagggatata
ttagtccttagatttggtctcgtaaacaaccagcgcaagtcactagaggagatcggaagg
cttcacggtgtaagcaaagaatggatcagaagagtcgagagccgagccctcacgaaacta
agaaacaaaagctctcttcaagatttaaggtattttttacattcgtag
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