Ipomoea nil (Japanese morning glory): 109180298
Help
Entry
109180298 CDS
T04663
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109180298
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109180298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
109180298
NCBI-ProteinID:
XP_019185332
LinkDB
All DBs
Position
Un
AA seq
673 aa
AA seq
DB search
MASKTGADVRLWRFSIVVYYLLLFASSVNAARSTPGSDSQEMKQSTPLRLQITDTHVVME
NNFITVTLSNPAGGIEGIKYRGIRNVLEYGLRETNRGYWDIVWSRPGISTGNFDRLPGTQ
FSVITADENQIEVSFTKTYNPNDSSSVPMDFDKRYVMLPGSSGFYTYAIYNHPEGWPDVD
IGETRLAVKLQRKLFNYMAISDDIQRVMPSDSDRSAGHPLDYKEAVLLTKPSNPSLKGEV
DDKYQYSLENKDTKVHGWVCPKPHVGFWIITGGDEFRSGGPIKQDLTSHVGPTALSIFFS
GHYAGNDFSLSLRNGEAWKKVFGPVFIYLNSDQGTDPKSLWENAKQQMVLETKSWPYDFP
KSEDYPSASQRGTVSGQLLIRDRYLSQELMPAKSAYVGLAPPGLAGSWQEDVKGYQFWTQ
TDDNGYFKISAVRPGNYSLYGWAPGILGDYKYNIDVKINPGDEINLGGLVFDPPRNGPTL
WEIGIPDRKSAEFFVPDPVPELMNYALTNHTEKYRQYGLWDRYTDAYPYQDLSYTVGQSD
YQKDWFFAHVNRKVGNDTYEPTTWTILFPLENVNWAGTYTLRIALASCNFAKIQVWINSD
PGTRMPGFTTGGNGRDNAIARHGSHGLYSLWSFEFPGTMVGNGRNTIYLRQPRGGYRFNG
AMYDYIRLEGPSY
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaagactggagcagatgttcggttatggcggttctctattgttgtttactac
ctcttgctctttgcttcttctgttaacgctgctaggtcaactccgggaagcgacagtcaa
gagatgaaacaatcaaccccgttgagactacaaatcacagatacacacgtggtgatggag
aataacttcatcacagtcacgttatccaatccagctggaggaattgaagggattaagtat
cgaggaattagaaatgtactggaatatggtcttagagaaacaaatagagggtattgggat
atcgtgtggagcaggccagggataagcacgggcaactttgataggcttccaggaacacag
ttcagtgtaataacagcagacgagaaccaaattgaagtctcctttacgaagacttataat
ccaaatgattcttcaagtgttcctatggactttgataagagatatgtaatgctgcctggc
agctctgggttctacacctacgccatatacaatcatcctgaagggtggcctgatgtagat
atcggtgaaactcgacttgctgtcaaactgcaaagaaaactgttcaactatatggcaata
tcagatgacatacagagagtgatgcccagtgacagtgatcgatcggctgggcaccctctt
gactacaaagaagctgttttactaaccaaaccatccaatcctagcttgaaaggagaggtg
gacgacaaataccaatactccttagaaaacaaggatactaaggtacacgggtgggtttgt
cccaagccacatgttgggttttggatcatcacgggaggggatgagttccgatcaggagga
ccaataaaacaagacctcacttcgcatgtcggtccgactgccttatcgatattcttcagt
ggtcattatgctggtaacgattttagtcttagcttgcgaaatggtgaagcctggaaaaag
gtttttggcccagtttttatttatctaaactctgatcaaggcactgacccaaaaagtctc
tgggaaaatgccaaacaacagatggttttagaaactaaaagttggccttatgatttccca
aagtctgaagactatcccagtgccagtcaacggggcacagtttcaggccaactactaatc
cgtgataggtatctgagtcaagaacttatgccagcaaaatctgcatatgtgggtctggct
ccaccaggacttgctggatcttggcaagaagatgtcaagggctaccaattttggacacaa
acagacgacaacgggtacttcaagattagtgctgtcaggcctggaaactatagcttgtat
ggttgggcccctggaatcctaggagattacaaatacaacattgacgttaaaatcaaccca
ggagatgaaattaatctgggcgggcttgtctttgatcctccaagaaatggtccaacttta
tgggaaatcggtatccctgatcgaaagtctgcagaattctttgtccctgatcctgtcccg
gagttaatgaactatgctttaacaaatcatactgaaaagtatagacaatatggattatgg
gatcgatacacagatgcatatccttaccaagatttgtcctacacagttggacaaagtgat
taccagaaagactggttctttgctcatgtgaacaggaaagttgggaatgacacgtatgaa
ccaacgacatggacaatcttgttccctctcgagaatgttaattgggcaggaacctataca
ctgcggatagcgttagcttcttgcaactttgcgaaaattcaggtttggattaacagtgat
cctggtacgagaatgcccggattcacaacaggcggaaatggaagggacaatgcaattgcg
aggcatggaagtcatgggttgtatagtctgtggagctttgagtttccaggaactatggtt
gggaatggaagaaacacaatatatttgaggcagccaagaggaggatatcggttcaatgga
gccatgtatgactacatccgtttggaagggccaagctactga
DBGET
integrated database retrieval system
