Ipomoea nil (Japanese morning glory): 109180328 Help Entry 109180328         CDS       T04663                                  Name (RefSeq) protein RST1   KO K27498   focadhesin Organism ini  Ipomoea nil (Japanese morning glory) Brite KEGG Orthology (KO) [BR:ini00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ini03019]     109180328 Messenger RNA biogenesis [BR:ini03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      109180328 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DUF3730 Adaptin_N TPR_TNPO3_IPO13_3rd Motif Other DBs NCBI-GeneID:  109180328 NCBI-ProteinID:  XP_019185383 LinkDB All DBs Position Un AA seq 1848 aa AA seqDB search MDAYSSLLEKIRIPQPSFQKLAVISIFEKLRSAPPHLGPDSHPGTEAITQCLHSASPAVV DQSVRELCRLVRDSKLDLSRGLLELQSALEATASRFVNLFVRGLGYLVRLGFLNNPHSFQ FQASETHPFVMILSSRKEVQAELVRQVLIFLAECKQCGMVEVCRFLTPFLNSAIVRMSSL VSLTSFLRDLLSSIASLCCSLPHEAIPITKLLIGRIKYFPCKNEDDYTEIFYLVECIADA YSVVLRQLVGNGLLVHEAQLCSVELLDALFSLHNDLLKPAGSIEYILEVSRRLLVVQKEL GLSFLPELSSAISFIFIILVHSELEHEQLSALKLLCFILRWKNDSGKDVHRSSCLINEEL LFIFPVINLVYSPSKSVKQAAIDLLSVLRKLSINLLAAPRTEVSTEKKHPSISTSAHIAV RLLQSLWLQDQSSLPGVFYLNFASGIESSVDKHNKAKPWTSMLSEYMQQVISRRKSSQSI SESHESLHTEMPLLLSGIACVLLMHQSLGHSAGDLLAICNKMEPKLGVPLMLVILFYNHM YSDNKNVVSHGMQLKLMGMLPSLASHSAMLPLVVQTILPMLQKDAKSVLYATAIRLICKT WECNDRVFGSLQGVLHANKFTEFASDREIYISMALSICDVCRKDPDRGVDLILSVEACIE HQDSFIQSLGLESLAHLCEADVVDFYTAWDVIAKQLNYSGNATVACSLCHLLRWGAMDAE SYTEAAIGVVEVLWEIGTSATVGHGWSKARASAFEALTHYEVGQFQGSLPDFNDRNLEFL TSETDLEVLRALEAFEVKIINHEHITRRRVVKQKRLPKSKIEKLLDVFPQVMFASGNGRR ARELPGASLFCLSFTLKGLNMPGASEALQDVLDKYKNAVVEIADSLQLSRNVLIALLALQ SWKPFMQRWIRAYIMLLDTKVHSAVLDKTSNAAKEILKFLIEIAERSPPRSAENIALAIG ALCSALPLSDHAIKSTASKFLLSWLFQHEHEYRQWSSAISLGLISSFQHVTDRKQKVEYI NALLEVLSVSKSTLVKGACGVGLGLSCQDLLTKSDAEDNFHLSKGALRMEEIDLLKKIIG SLSKLICPLTQSSSDVLINAFSWLRLGSDDFDSNITPKFLGQCSDDFEEDVWGVAGLILG LGSSVGAIYRAGFYDAVLNLKTLLFSWIPNLNPSIPFLTTSAKSELLFSVGACLAAPIVM AFCHRVELMDGTEIDQLVGCYKHLISELVSVQKFSTLHQSLLMASCIGAGSLLGTILNGS LHSLKVEHVRDLLALFRKSYSDPNPPLIHLGAIIGAVNALGAGAGTLIQDHPSFSSHATN NQKESSYINGPLLSSPALEPDLTSLVQDIFLVAQNPDADQLQQYAAWAASFLRHSLQLQE HYNEPTTVSGAGTKNVSHIFSEDSTVLKLSLWLSHLKHPGTGNITHVNTISMVLRCLEHA PRLPSLDWGAIIRRFMRYESEVAELLSQDVTFKKGHLREDCLLFSLSHAYQFDHLLIFLD ELCDLARMRTLEPTLQSCILLHLADLTKIFSSSRLVKLFNDVACFLSWLVLSGLYSPEQK SSLRFSCWRGLNQCLNESSLDAQSYTSEIENCMKVLFNLLPQFPSAGSRELYQANIIEEW SEAVRCLGKSEQGWLLDLLQISEVNLIEANSQLESVKKIQVKSRLVQTGSVPFSELGKLK AYMLNCRCEVIWDALLEVTETLHYADGSVKRQWLVNAMEISCVSKFPSTALQFIGLLCGS CCRYMPVLVVDQMTVLSDLPVTLTSLLSDSNWAVVAESVVSHLWSLTLRVYNLAKHTADD YPPNQLPVDSSEYDKAAFLFQVLHHSCMSLKNYLPPEKLLQLANITIH NT seq 5547 nt NT seq  +upstreamnt  +downstreamnt atggacgcctactcttctttactagagaaaatccgcattcctcaaccatcgtttcagaaa ctcgcagtgatttcaatcttcgagaagcttcgctccgcccctccacatctgggccccgac tcccaccccggaactgaagccatcactcagtgcctccactccgcctctcctgccgtcgtt gaccagtcggtccgtgaactatgtcgcctcgtccgggactccaagctggacctttctcgc gggttactggagctccagtcagccctcgaagccactgcttctcgcttcgtaaatctcttc gtcagaggtttaggctatcttgttcggttaggtttcctgaacaacccgcattcctttcag ttccaagcctcagaaactcatccatttgtcatgatactttctagccgaaaagaggtccaa gccgagcttgtgcgacaggtgcttattttcttagcggagtgtaagcaatgcggcatggtg gaagtttgtcgattcctaacaccttttctaaattctgcaattgtgcggatgtcctcttta gtttctctcacttcatttctgagagatttattatcatcaatagcatcattatgttgttca cttcctcatgaggctatccctattaccaagctactaattgggcggattaaatactttccc tgtaaaaatgaggatgactatacagagattttttatttggttgaatgcatagcggatgca tactctgtggtcttgaggcagcttgttggaaatggattgctggttcatgaagctcaatta tgcagtgtggaactactggatgcccttttctcattgcataatgatcttctcaagccggca ggttccattgagtacattttagaggtatcaaggcgcttattggttgtgcagaaagagctt ggcctgagttttttacctgaactatcatcagcaatatcgttcatatttataattcttgtc cattcagagcttgaacatgaacaactctctgcactgaaactgctttgctttatcttaagg tggaaaaatgacagtgggaaagatgttcatagatcctcatgcctaataaatgaagagctt ttattcatttttcctgtcatcaaccttgtatactctccatctaaatcagtaaagcaagca gccatcgatttgctttctgttttgagaaagctctcaattaatttattggctgcaccaagg actgaagtatcaactgaaaagaaacatccttccataagtacatctgcacacattgctgtt aggctactgcagagtttgtggcttcaggaccaatcttcattacctggtgttttctaccta aactttgcctctggtattgagtcctctgtagacaagcacaataaagcaaaaccatggacg tccatgttaagtgagtatatgcagcaagtcatttcaagaagaaagtcctctcaatcgatc tctgaatctcacgaaagccttcatactgaaatgcctttgttactcagtgggattgcttgt gtacttcttatgcatcaaagtcttggacattctgctggagatctcttggctatttgcaac aagatggagcctaaactgggtgtgccattgatgctagtcattctattctacaaccatatg tattctgacaacaagaatgttgtttcccatggcatgcagttaaaactcatgggcatgctt ccatcacttgcttcacattctgcaatgttacctcttgtagttcaaacaattctaccgatg cttcaaaaagatgctaaatctgttttgtatgccactgcaatacgtttgatctgtaagaca tgggagtgcaatgatcgtgtctttggaagtttacagggagtactacatgcaaacaaattc actgagtttgcttctgatagagagatctatattagtatggctctctccatttgtgatgtt tgcagaaaggatcctgataggggtgttgaccttatcttgtctgttgaggcttgcattgaa caccaagattcttttattcagtctcttggtcttgaaagcctcgcccatctttgtgaagca gatgtagtagatttttatactgcctgggatgtgatagcaaaacagctaaactactctgga aatgccactgttgcctgcagcctctgtcatctcttaagatggggtgcgatggatgctgaa tcatacactgaagctgctataggagttgtggaagtattgtgggaaatcggaacttctgca actgttggtcatggttggtcaaaagctcgagcatctgcttttgaggcattaactcattat gaggtaggtcagtttcagggaagccttccagattttaatgacaggaatttggagtttctt acatctgagactgatctggaggtgttgagagccttagaagcatttgaagtcaaaatcata aatcatgagcacattacacgtagaagagtggtgaagcagaaaagactgccaaaaagcaag attgaaaagttgctagatgttttccctcaggtcatgtttgcttcaggaaatggcagaaga gctagagaattacccggtgcatctctcttttgcctttccttcactcttaaaggcttgaat atgccaggagcatcagaagcattgcaagatgtactagataaatacaagaatgcagtggtt gagatagctgactctcttcagctctcaaggaatgttttgattgcactactggcattacaa tcatggaaaccatttatgcaaagatggattagggcttacatcatgttacttgataccaag gtgcattctgctgtgttggataaaacttctaatgctgctaaggaaattttgaagtttttg atagaaattgctgaaagatctcctcccagatctgctgagaatattgcattagcaattggg gctctttgttcggcactccccttatctgaccatgctattaaatcaactgcttcaaaattc ttgttgagttggctgtttcagcatgaacacgagtatcgacaatggtcttctgctatttct cttggattgatatcaagtttccagcatgtgactgatcgcaagcagaaagtagaatatatt aatgcacttcttgaggtgttatctgtgagcaaaagcacccttgtgaaaggagcctgtgga gttgggttgggtttatcatgtcaagatcttcttaccaagagtgatgctgaagataatttt catctgagtaaaggagcactcagaatggaggaaatagatttgttaaaaaagatcattggg agcttatccaagttgatatgtccgttaactcaatcttcatccgatgttctgataaatgca ttttcatggcttcggcttggatcagatgattttgattcaaatatcacccccaagtttctt ggacaatgcagtgacgattttgaggaagatgtgtggggtgttgcagggctcatattggga ttaggtagttctgttggtgcaatctatagagcagggttttatgatgcagttctcaatctg aaaaccttacttttttcttggattcccaacttgaatccttccattccatttcttaccacc agtgcaaaaagtgaacttctgttctccgtgggtgcttgtcttgcagcacctattgtaatg gctttctgtcacagagtagaactgatggatggtactgagattgaccagctagtaggctgc tacaagcatcttatttctgaattagtctctgttcaaaagtttagcactcttcatcagagc ttgttgatggcatcttgtattggagcaggaagccttcttggtaccattttgaatggaagt ctgcactctttgaaagttgaacatgttagagatttgctggcattattcaggaagagttac tctgatccaaaccctcctcttattcatttgggtgctatcattggggcagtaaatgcttta ggagcaggtgcaggaacattgattcaagatcacccttcattctcatcacatgctactaat aatcaaaaggaatcttcttacatcaatggaccattgctctcaagtccagcattggagcct gatttgacatcactggtgcaggatatttttcttgtggcacaaaatcctgatgctgatcaa ctgcagcagtatgctgcatgggcagcttcattccttaggcattctttacaactgcaggag cattataatgaacctactacagttagtggtgcaggcacgaagaatgtctcacacattttt tctgaggacagcacagttttgaagctctctttgtggctaagtcatctgaaacatcctggg acaggtaatattacacatgttaacaccatttcaatggttttacgttgtcttgagcacgct cccagattaccatcgttagattggggagcaatcatcagaagattcatgagatatgagagt gaagttgctgaattgttgtcgcaagatgtaaccttcaagaaaggacatctgagggaggac tgcctacttttctctctatctcatgcctatcaatttgatcacctccttatcttccttgat gaactctgtgaccttgccaggatgaggacacttgagccaactctgcaatcatgcatactc ctacacctggctgatctaactaagatattctccagctctcggcttgtgaagctatttaat gatgttgcttgtttcttatcttggttagttttatctggcctttatagtcctgaacagaaa agctcattaaggttttcatgctggagaggccttaatcagtgtttgaatgaatcttctctt gatgctcaaagttatacgtctgaaatagaaaactgtatgaaggttctctttaatttgctg ccccagtttccttctgctggctctagagaactgtatcaggcaaatatcatagaagaatgg tctgaagcagttagatgccttgggaagtctgaacaaggatggttattggatcttctgcag atttcggaggtgaatcttatagaggcaaatagtcaacttgaatctgtgaaaaagattcaa gtgaaatcaagattagttcaaactggctctgttccatttagtgaacttggcaaacttaaa gcttatatgttgaactgcagatgtgaagttatctgggatgctctactagaagttacagag actttgcactatgctgatgggagtgtcaaaagacaatggcttgttaacgcaatggaaatt agctgtgtctcaaaatttccttccacggctctgcagtttattgggctactatgtggaagc tgttgcagatacatgcctgttttagttgtagatcaaatgacagtgttgagtgacctacct gtcacactaacatcccttctttcggatagcaactgggcagtagtagcagaatctgttgtt tctcatctgtggtcattaactttacgagtttataacttggcaaaacatacagcagatgat tatccgcctaaccaactgcctgttgacagtagtgaatatgacaaggcagcattcctcttc caggtattgcaccattcatgcatgtctctgaaaaactacctacccccagagaagctactt cagttggcgaacatcaccatccattag

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