Ipomoea nil (Japanese morning glory): 109180487
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Entry
109180487 CDS
T04663
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109180487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109180487
03036 Chromosome and associated proteins [BR:
ini03036
]
109180487
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109180487
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109180487
PBAF complex
109180487
GBAF(ncBAF) complex
109180487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
109180487
NCBI-ProteinID:
XP_019185648
LinkDB
All DBs
Position
Un
AA seq
545 aa
AA seq
DB search
MSGNNNNPPKSIGVSSPFGNSMSVNPAAHLQSQPQPQQRMPSGFPNQFQLSQLSAAHAQA
IAQAQAQSKAHAHAQAAAHAQFQAQLQAQGLALAPLSQAHTAGIANLGSSPSLPGIGNAS
VKRFPQKPPVRPPGLSTTNTISPMRTMDLSAAARKKKQKLPEKQLQERVAAILPESALYT
QLLEFESRVDSALARKKVDIQDALKTPPSVQKTLRIYVFNTFANQIRTIPKKPNAEPPTW
TLKIVGRILEEGMDPDQAAMLQKSSSMYPKFSSFFKRVTISLDQKLYPDNHIIIWDSARS
PALHEGFEVKRKGDQEFTVNIRLELNYSPEKYKLSQPLTEVLGIEVDTRARIIAAIWHYV
KARKLQSADDPSYFNCDPLLQKVFGESKVKFTAVTQKITHHLSPPQPIHLEHRIKLSGNS
PAGSACYDVLVDVPFPIQRELSALLASTEKSKEIDACDEAICAAIRKIHEHRRRRAFFLG
FSQSPVEFINALIDSQGKDLKLVTAEASHNAEKERRSDFYSQPWVEDAVIRYLNRKPTTD
APGSS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaacaacaataacccgccaaagagcattggggtttcctctccctttggaaat
tccatgtctgtcaatcctgctgctcaccttcagtctcagccccaacctcaacagcgaatg
ccatctggttttccgaatcagtttcagttgtcccagctctctgcagctcatgcccaagcc
attgctcaggcacaagctcagtctaaggctcatgctcatgctcaagcggctgcacatgct
cagtttcaggcacagttacaagctcagggtctggcccttgctccccttagccaggcccat
actgctgggattgcaaatttaggctcatccccttctcttccagggattggaaatgccagt
gtcaaaaggtttccacaaaaaccacccgtccgtccacctggcttgtcaactaccaacaca
atttctccgatgagaaccatggacctttctgctgctgctcgtaagaaaaagcagaagctt
cctgaaaagcaattacaggaaagagtggcagcaattttgcctgaatctgctctctacact
cagctacttgagtttgagtctcgtgtggattctgcacttgcaagaaagaaagttgatata
caggatgcattaaagacccctccatctgttcagaagacccttaggatttatgtattcaac
acttttgctaaccagatccggactattcctaaaaaacccaacgctgagcctcctacatgg
actctcaaaatagtagggaggattttagaggaaggaatggatcctgatcaagctgctatg
ttacagaaatcaagctctatgtacccaaagttttcttctttcttcaaaagagtcaccatt
tccctggaccagaaactctatcctgataaccatattataatatgggacagtgctagatct
cctgctcttcatgagggcttcgaggtaaaaaggaagggagatcaagaattcactgtgaat
attagattagagttgaattactcgcccgagaagtataaactttcacaacctttgacagaa
gttttaggtattgaggttgatactcgtgcaaggattatagctgcaatctggcactatgtt
aaagctagaaagttgcagagtgctgatgatccttcatatttcaattgcgacccacttctt
caaaaagtgtttggggaaagtaaggttaaattcacagcagtgacacaaaagatcacgcat
catttgtctcctccacagcccattcatttagaacacaggattaaactttctggtaatagc
cctgctggaagtgcatgctatgacgtgttggttgatgtgcccttcccgatacagagagaa
ttgagtgcattgctggcaagcacagaaaaaagtaaagagatagatgcctgtgatgaagca
atttgtgctgctattaggaaaatccatgaacacagaaggagacgggcattctttcttggt
tttagccaatcacctgttgagttcattaatgctttaattgattcccagggtaaggatctc
aagcttgttactgcagaagctagtcacaatgccgagaaagagcgtcggtcagatttttac
agccaaccctgggttgaagatgctgttattcgctatctgaatcgcaaaccaactacagat
gcccctgggagctcatga
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