Ipomoea nil (Japanese morning glory): 109180537
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Entry
109180537 CDS
T04663
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04120
Ubiquitin mediated proteolysis
ini04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109180537
04120 Ubiquitin mediated proteolysis
109180537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109180537
Enzymes [BR:
ini01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109180537
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
U-box type E3
109180537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Herpes_UL69
Motif
Other DBs
NCBI-GeneID:
109180537
NCBI-ProteinID:
XP_019185714
LinkDB
All DBs
Position
Un
AA seq
1040 aa
AA seq
DB search
MATQKQQRTPEEIEDIIIRKIFLVSLIDSMENDSRFVYLEMTAAEVLSEGKDLRLSRDLM
ERVLIDRLSGNFAAAEPPFQYLVNCYRRAHEEGKKIANMKDKSVRSEMELVVKQAKKLAV
SYCIIHLGNPDMFPNWETNTSNVSPLLPLIFSEVSLAVDGFGGSSSSGGVTCPPGLLDDF
FKDGDFDSLDPILKQLYEDLRGSVLKVSALGNFQQPLRALLLLVKYPVGAKSLVNHPWWI
PKNMYMNGRVIEMTSILGPFFHVSAIPDNTLFKSQPDVGQQCFSDASTRRPADLLSSFTT
IKTVMNNLYDGLTEVLKCLLKNTNTRENVLEYLAQVINKNASRAHIQVDPLSCASSGMFV
NLSAVMLRLCEPFLDHNLSKRDKIDSSYVFYSKRLELRDLTAMNASSEEVSEWISGNNPG
KADACKDSSGGELRLLESQEATSSGNNTGGSSILHDNKPKSNCTEKDKYSFICECFFMTA
RVLNLGLLKAFSDFKHLVQDISRCEDSLSTFRTMSEQGQVPQSQNDIARLEKVLELYNQE
KLCYEAQILRDGGLLQRALSFYRLMIVWLVDLVGGFRMPLPSTCPMEFASMPEHFVEDAM
ELLIFASRIPRALDGILLDDFMNFIIMFMGSPQYIRNPYLRAKMVEVLNCWMPRRSGSSA
TTTLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRN
AWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNRVEWEQRPAQER
QERTRLFHSQENIIRIDMKLANEDVSMLTFTSEQITAPFLLPEMVERVASMLNYFLLQLV
GPQRKSLSLKDPEKYEFRPKELLKQIVKIYVHLARGDKENIFPTAITKDGRSYNEQLFSA
AAVVLRRIGEDSRIIQEFIDLGAKAKVAATEAMDTEAALGEIPDEFLDPIQYTLMRDPVI
LPSSRITLDLPVIQRHLLSDSTDPFNRSHLTADMLIPNTELKAKIEEFVRSSKKSKQQRD
LGMQSTKTTIQTTDTSTLIE
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcagaaacagcagaggacgccggaggagatcgaggatataatcatccggaaa
atcttcctcgtgtctttgatcgattcgatggagaatgattctaggtttgtgtatttggaa
atgacagcggctgaggtgctcagcgaggggaaggatttgaggttgtctagggatttgatg
gagagagtcctgatagatcgactttctgggaacttcgctgccgccgagccgccattccag
tatttagtcaattgctaccgtcgagcgcacgaggaggggaagaagattgctaatatgaaa
gataagagcgtgagatctgagatggaattggtggtgaaacaagcaaagaagttggcggtt
tcctactgtataatacatttagggaaccctgatatgtttccaaattgggaaaccaacacg
tccaatgtttctcctttgctgcctttgatattctccgaggtttctcttgcagtggatggg
tttgggggcagtagtagtagtggtggagtgacttgtccaccagggcttcttgatgatttc
tttaaagatggggattttgatagtctagacccgattttgaaacagttgtatgaggatttg
agaggaagtgtgctaaaggtatcagctttggggaattttcagcagccactcagagctttg
ttgctattagttaagtatccagtaggggcaaaatctctggtgaatcatccttggtggata
ccaaagaatatgtacatgaatgggagggttattgagatgaccagcattttgggccctttc
tttcatgtcagtgctatacctgataatacattattcaaaagtcagcctgacgttggccag
cagtgcttctcagatgcttcaacacgtcgtccagctgatctattgtcttccttcacaaca
atcaaaactgtcatgaacaacttatacgatggcttgacggaagtgctcaagtgtcttctt
aagaatacaaacacccgcgaaaatgttctcgaatatcttgcgcaggtgatcaacaaaaat
gcatcgagggctcatattcaggttgatccattatcctgtgctagttcaggcatgtttgtc
aatctcagtgctgttatgcttcggctttgtgaaccatttttagatcacaatttgtcaaaa
agggataagattgattccagctatgtgttctatagtaaacgtttggaattgagggattta
actgctatgaatgcatcatctgaagaagtctctgaatggataagtggaaataatcctggg
aaagcagatgcctgtaaagatagtagtggtggagaactcaggttgttagaatctcaggaa
gccacaagctctggcaataatactgggggatcttctatcctacatgacaacaaaccaaaa
tccaattgcactgaaaaagataaatactcattcatttgtgaatgcttcttcatgacagca
agggtccttaatctaggcctgttaaaagcattttctgactttaagcatcttgttcaggac
atttcaaggtgtgaagatagtttgtctacttttagaaccatgtcagaacagggacaagtt
ccacaatctcagaacgatatagcacgccttgagaaagtgcttgagttgtataatcaggag
aagctatgctatgaagctcagatacttagggatggagggcttcttcaacgagcattgtcc
ttctataggctaatgatcgtttggttggttgaccttgttggtggtttccggatgcctcta
ccatcaacttgccctatggaatttgcgtccatgcctgagcactttgtggaagatgccatg
gagttgcttattttcgcttctagaatacctagagctttggatggtatattattggatgat
ttcatgaactttattatcatgttcatgggaagtccacagtatattagaaacccatattta
agagcgaagatggttgaagtccttaactgttggatgcctcgtagaagtggctcatctgca
actacaacattgtttgaggggcaccaactttccctggagtatcttgtgaggaatctcttg
aagctttatgttgatatcgaattcacaggttcccacactcagttctatgacaagttcaat
atccgtcacaacattgccgaacttcttgaatacctatggcaggttccaagccatcgcaat
gcgtggagacagattgctaaagaggaggagaagggtgtctatttgaatttcttgaacttc
ttaatcaatgatagcatttatcttcttgatgaaagtctcaacaaaattcttgaactcaaa
gaactggaagctgagatgtctaatagagtggagtgggagcaaagaccagctcaagagagg
caggagaggactcgacttttccactctcaggagaatatcattcgaattgatatgaagctg
gcaaatgaagatgtgagcatgctgacatttacttcagaacagatcacagctccctttcta
cttcctgagatggtggagagagttgctagtatgctgaattactttctgttacaactcgtg
ggcccacagagaaaatctctaagcttaaaagaccctgaaaagtatgaatttcgtccgaaa
gagttgttaaagcagattgtcaaaatatatgtgcatttggctagaggagataaggagaac
atcttcccaaccgcaatcactaaagatggtcgttcatataatgagcagttgtttagcgct
gcagctgttgttcttagaagaatcggtgaagactcgaggatcatacaggagtttattgat
ctcggtgctaaagccaaagttgcagcaacagaagccatggacaccgaagctgctcttgga
gaaatccctgatgaattcctcgatcctattcaatatacattgatgagggatcccgtcatt
ctgccctcatcgaggatcacactcgacttgcctgttattcagcggcatcttctgagcgat
agtacggatccattcaaccgttctcatctaaccgcggacatgttgattccaaacaccgag
ctgaaggccaaaatcgaagaatttgtccggtcatccaaaaaatcgaaacagcagcgtgat
ttgggtatgcaaagcacaaaaacaacaatccaaacaacggacacttcaacgttgatcgaa
tag
DBGET
integrated database retrieval system
