Ipomoea nil (Japanese morning glory): 109180700
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Entry
109180700 CDS
T04663
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03440
Homologous recombination
ini03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109180700
03460 Fanconi anemia pathway
109180700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109180700
03036 Chromosome and associated proteins [BR:
ini03036
]
109180700
03400 DNA repair and recombination proteins [BR:
ini03400
]
109180700
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109180700
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
109180700
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
109180700
FA (Fanconi anemia) pathway
Downstream FA components
109180700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
BRCA-2_OB3
Tower
Motif
Other DBs
NCBI-GeneID:
109180700
NCBI-ProteinID:
XP_019185953
LinkDB
All DBs
Position
Un
AA seq
1111 aa
AA seq
DB search
MPTWQIHSDAGNTFRWEMSDQQPSSSGVLAPMPPLDSHCLPSMTDLLRRQGCAKLMENSN
GNSASEKASIFIDGLEKPMAVKQSSIAKALSILRDEEAFAGENGREESGTGFQNLMLPTG
SDNAINQSKPAFLISSRKAANMSNSMFQTGSGKSVTISPAGLVRARKLLNLEETETFQDL
EQANRLSASADDPFGWQNSFPLRRTEESNSGGVNPNVFHFSHKPHAIKFQTAGGRSISVS
SDALQRAKSLLGDTEHSNFLDEKDAASPLFSFSDNRKSNSNLSINKSKSCTPSYQCSANG
KSSSSRFTSPMKSTLQKRPLSASLENMHPANNLIKHFDAVADDSAIQSYNGIPRHRHHLQ
QKSNMLPISYTEKDIASSPTPLERSSIRVLTDISNTIAPGHTDGKQNFCGTRRLGRMNSV
SPFKRPRVAKFTPPLNKNMSVIPNGMSNLAPKESSFKQRVSDRYPFEVVRLYMKEYVGEP
PCLQTKLVNVGDQVRTMNPATAETYVFHDESGLGVLGIEAFYRMLSHFGASEQYLSKVWA
ANHYKWIVWKLACYERCFPAKFSGKLLTFSNVLEELKYRYEREVNYGHRSAIKRILEGDA
PPSSMMVLCISSIDPVCDSKVRPQDHPILPVGVERTSKIELTDGWYSITALLDGILSKML
AAKKLFLGQKLRIWGASLCGWVGPVSPLEVSKETSLVLHINGTYRAHWADRLGFCKGRGV
PLAFNSIKDSGGAVPITLVGISRIYPVLYRERLSNGGYIVRNERMEAKAINQYNQRRSIV
AEGMASEIQNTNIDILIGNDYESEEGAKLLKILETAAEPDILMAEMTFEQLNSFSSYKAK
LEAKKQSHTQKSLDRALEAAGLKTRDVTPFMRVRVVGLTSKSTRQGHSTRDGLITIWNPT
EEQKVELTEGQAYAVSGLVALSSDSNTLHLQTRGSTTKWQPLSSSGIQYFWPFFSPRRPN
SLSSLGEVPLSSEFDIVALVIYVGELHTVARQKKQWVFVTDGSQTALDNSLLAISFSSVN
TENESFAPEHSYPEGTVVSFCNLIKRDRDRTNHLWVAEGTETSTYHLSYDHPHCSHFKRS
VSFLKNWVKTSGSRIEQLKGKVISIISNSVA
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtggcagattcattccgatgccggaaacactttccgatgggaaatgtctgat
caacaaccgtcttcaagcggtgtccttgctccaatgccccctctggactctcattgcctt
ccctccatgacggatctcttgcgtcgtcaaggatgtgcaaagttaatggagaattctaat
ggaaattcggcctcggagaaggcttctattttcatagacgggttggagaaacccatggca
gtaaagcaatcctccatagccaaggcactatccattcttcgggatgaagaagcctttgca
ggtgaaaatggtagagaggagagtggaactgggtttcagaatcttatgttacccactggt
tcagataatgcaattaatcaatcaaaacctgctttcctgattagctcacggaaagcagca
aatatgtcaaattcaatgtttcagacagggtctggtaaatcagtcactatatcaccagca
ggtcttgtaagagccagaaagttattgaacttggaagaaactgagacttttcaagacctt
gagcaggcaaacagattgtcagcttctgctgatgacccttttggctggcaaaattcattt
cctttacgaaggactgaggaatccaactcaggtggggttaatcccaacgttttccacttc
tcccataaaccacatgcaatcaagtttcaaacagctggtgggagatccatttcagtttct
agtgatgcattgcaacgtgcaaagagcctgcttggagatacagagcatagtaatttccta
gatgagaaggatgcagcttctccattgttttcattttctgacaacaggaagtccaactct
aacctttcaataaacaaaagcaaatcatgtactccatcgtatcaatgttcagcaaatggt
aaaagttcttccagcaggtttacatctccaatgaagtcgactctacaaaaaagaccatta
tctgctagtttagagaatatgcatccagcaaacaacttgatcaagcattttgatgcagtt
gcggatgacagtgcaattcagtcttacaatggtattcctcgtcatcgacaccatttacag
caaaagtccaatatgcttccaatcagttatactgaaaaagatattgcttcaagtcctaca
ccgcttgaaagatcatcaattagggtgctaactgatatctcaaacactattgcccctgga
catactgatggcaagcaaaatttttgtgggacgaggagacttgggaggatgaattctgtt
tctcctttcaagaggccccgagtagcaaaatttactccccctctgaacaagaacatgtca
gtcattcctaatgggatgtcgaatttagcgccaaaagaatcctcctttaaacaaagggtt
tcagatcggtacccctttgaggttgtgcgattgtatatgaaggaatatgttggagagccc
ccatgcttacaaaccaagctagtgaatgtgggagatcaggtgaggacaatgaatccggca
actgctgaaacatacgtgtttcatgatgaatctggcctgggtgttcttggaatagaggct
ttttaccgaatgctttctcattttggggcttcagagcaatacctttctaaagtgtgggct
gcaaatcactataagtggattgtttggaagctagcatgttatgaaagatgttttcctgct
aaattttctgggaaactgctgacattctccaatgtgctggaagagttaaaatatagatat
gagagagaagtaaattatggtcatcgatctgcaattaaaagaattctagaaggtgatgca
ccaccttcttcaatgatggtgttgtgcatttcttccattgacccagtctgtgactccaaa
gttagacctcaagatcatcctatattgccagttggggtagaaagaacttcaaaaatagag
ctaactgatgggtggtattcaattactgctcttttagatggaatattgtccaagatgtta
gctgccaaaaaactgtttttgggccaaaaactcaggatctggggagctagcctatgtggc
tgggtggggcctgtttcaccacttgaggtctcaaaggaaactagtttagtactgcatata
aatgggacgtacagagcacattgggctgaccgcttaggattttgtaagggtagaggtgtt
ccactagcatttaattctatcaaggattctggaggtgcagtccctattacattggttgga
atttctaggatataccctgttctatacagagaaagattaagtaatggaggatacattgtg
aggaatgaaaggatggaagctaaagcaataaatcaatataaccaaagaaggtccattgtt
gcggagggaatggcctctgaaattcaaaacacaaacatagatatccttattggcaatgat
tatgaaagtgaagaaggggcaaaactcttaaagatacttgagacggcagctgaaccagac
attcttatggcagaaatgacttttgaacaactaaactcattttcttcttataaagctaaa
ttagaggccaagaagcagtctcatacacaaaaatctcttgacagagctctagaagctgct
ggtcttaaaacgagggatgttactccatttatgcgagttagagttgttggattaaccagt
aaaagtactcgacaaggacattccacacgagatggcttaattactatctggaatccaact
gaagaacagaaagtggagcttactgaggggcaggcttatgctgtttcagggcttgtggcc
ctaagctctgattcaaacaccctccacttgcaaacaagaggatcaacaaccaaatggcaa
cccttatcttcctctggaattcaatatttttggccatttttcagtccccgaagaccaaat
tcattgtctagtttgggtgaagttcctctctcgagtgaatttgatattgttgcactggtc
atttatgtgggagagctgcatacagttgctcgtcaaaagaagcagtgggtgttcgtaaca
gatggatcgcaaacagcattggataattcattgttggctatcagcttcagttcagtgaac
actgaaaatgaatcatttgcaccagaacatagttatcctgaaggaacagtggtaagtttc
tgtaatcttatcaagagagatagagatcggacaaatcatctctgggtggctgaagggaca
gagacttcaacctatcacttaagttatgatcatccacactgttctcattttaaaagatcc
gtttcttttctcaaaaactgggtgaagacctctggctcgagaattgaacagctgaagggg
aaagttatatccattatcagcaactcggtagcatag
DBGET
integrated database retrieval system