Ipomoea nil (Japanese morning glory): 109181077
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Entry
109181077 CDS
T04663
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109181077
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109181077
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
FtsZ_C
Motif
Other DBs
NCBI-GeneID:
109181077
NCBI-ProteinID:
XP_019186377
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All DBs
Position
Un
AA seq
460 aa
AA seq
DB search
MAASTKILWWVYLALLSIAAVIPATTADVSDDVWKQREAEARRGLLQAYHPNPEKITTEL
NERVSIGLNETYNNRELYDDSNNNNNDNVTRRELRRKKGSKEPCRATNPIDQCWRCRADW
SDGPNRFRLADCALGFAKGTTGGKGGRIYVVKDASDDDVQEPKAGTLRHAVIQKEPLWIV
FAASMTIKLSGELLVQGNKTIDGRGAFVNIAGGAGMTLQSVNNVIIHNIKVGDIKSSPGG
IIRDCVDHKGMRTHDEGDGITIFGSHHVWIDHVSMHNCEDGLIDAAAGATAVTVSNCHFT
DHDKVLLFGANNEDSIDKRMQITLAFNHFGKRLHQRMPRCRWGLFHIVNNDYTHWEMYAV
GGSSGATIISQGNRYIAQPGENFFKEVTHRDCPDDSWKKWTWVSSGDVFMNGAFFTPSGD
PKGVEKYGYRDNLRPLSGKEVGRLARYSGHLGRCTPGRKC
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctctaccaagatactttggtgggtttacttggcgttgttgtcaatcgccgcc
gtgatcccggcaacgacagcggatgtcagtgatgacgtgtggaagcagcgcgaggcggag
gccaggagaggtcttctccaagcctatcaccccaatcctgaaaaaattacaacagaatta
aatgaaagagttagcataggtttgaatgagacgtacaacaacagagaattgtacgacgac
agcaataataataataatgataatgtgacgagaagagagctgcggcgtaagaagggaagc
aaggagccgtgcagggcgacgaaccctattgatcagtgctggagatgccgggcggactgg
agtgatggcccgaatcgtttcaggttagccgactgcgccctgggttttgccaaagggact
accggcggaaagggcggcagaatctacgtggttaaagatgcatccgacgacgacgtgcag
gagccgaaggcgggaactcttcggcatgcggtgattcagaaggagccgttgtggatcgtg
ttcgctgcgagcatgaccatcaagctgtccggggagcttctggtgcaaggcaacaagaca
atcgacgggcgcggggcgtttgtgaatatcgcgggcggagcaggtatgacgctccagtcc
gtaaacaacgtcattatccacaacattaaagtcggggacattaaatcttctcccggcggc
atcatcagagactgcgttgatcacaaaggtatgaggactcatgacgagggcgatggaatc
accatcttcgggtcccaccatgtatggatcgaccacgtctccatgcacaactgcgaagac
ggactgatcgacgctgcggccggcgccaccgccgtcactgtttctaactgccacttcacc
gaccacgacaaggttctgctcttcggagccaacaacgaggactccatcgacaagaggatg
caaatcaccttggcattcaaccacttcgggaagaggctccaccagaggatgccacgttgc
cggtggggacttttccacatagtcaacaacgactacactcactgggaaatgtacgcggtg
ggtgggtcctccggcgccaccatcatcagccagggcaaccgctacattgcgcagccgggg
gagaacttctttaaggaggtgacccacagggattgccccgacgattcatggaagaaatgg
acgtgggtgtcttccggcgatgtcttcatgaacggcgctttctttacaccatccggagat
cccaaaggggtggaaaagtacggctaccgtgacaatctcaggccactatctgggaaagaa
gttggtaggctcgccagatattcgggtcatcttggtcgttgcacccccggacggaaatgc
tag
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