Ipomoea nil (Japanese morning glory): 109181151
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Entry
109181151 CDS
T04663
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Module
ini_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109181151
Enzymes [BR:
ini01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109181151
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109181151
NCBI-ProteinID:
XP_019186452
LinkDB
All DBs
Position
Un
AA seq
448 aa
AA seq
DB search
MPPTTRNLVLVIFFALSLFSASCDGGSLLHTRTSCHRHHRHRCRYRKHHKGGHTHNKHLK
GRKQPHQKVLSVDDFGAKGDGTTDDSEAFKKAWNKFCNSRGSMLVIPNRKTYLLSPTHFS
GPCYPNLKLRIHGTIKASGNKNDYKSDRQRWLKFSDLKNFMVDGGGVIDGNGQKWWKDSC
KVQKSEICDRGDIPYAVTFQNGTNISVEDLLFKNPQKMHLVFQECHSVRVSNIVIQAPED
SPNTDGIHISHTTDVEITNSVIATGDDCISIVNESNNVRISRIVCGPGHGISIGSLGKMD
NLEEHVTNIIVDTVVFKGTTNGVRIKTWQGGRGYARNILFDNIVMKNVTNPIIIDQFYCD
NPRDNYGNILPCPEQVGAVGVSNVIYRNIRGTSARELAIRFECSKTVPCKGILLENVNLI
GEEDKGVVKAQCYNVKYAIKGHVFPSCG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgacgacaagaaacctcgtactggtcatattcttcgcactgtcgttattttct
gcctcatgcgacggcggcagcctccttcacactcggacttcgtgccaccgccaccaccgc
caccgctgccgctacaggaaacaccacaaaggtggtcacacacataataagcatttgaaa
ggcaggaaacagcctcatcagaaagtgttgagtgtagatgattttggcgccaagggtgat
ggaaccaccgatgattccgaggcgtttaagaaagcttggaacaagttttgtaactcacga
ggatccatgcttgtaatccctaataggaagacatatttgcttagtccaacacactttagt
ggcccctgttatccaaaccttaaacttaggatacacggaacgatcaaagcttctgggaat
aaaaatgactacaaaagtgacagacaacgttggctcaagttcagtgacttgaaaaatttc
atggttgatggtggaggagtcatagatggcaatggccaaaaatggtggaaggactcttgc
aaggtccaaaaaagtgagatttgcgatagaggcgatataccatatgcagtcacattccaa
aatgggacaaatataagtgtagaagacttattattcaaaaatccgcagaaaatgcacctt
gtttttcaagaatgtcatagtgttagggtttcaaatattgttatacaagctcccgaggac
agtcccaatactgatggaattcacatatcacatactacagacgtcgagattacaaattcc
gtgattgctacaggcgatgattgtatttcaatagtgaacgaatcaaataatgttagaata
tcacgtatagtatgtggaccgggacatggaattagtataggaagcttagggaaaatggac
aatttagaggaacacgttacaaatatcattgtggacacagtggtgttcaaaggaactact
aatggagtcagaatcaaaacttggcagggaggaaggggatatgcaaggaacatcttgttc
gacaacattgtaatgaagaatgtaacaaatcccataatcatagatcagttctactgcgat
aatcctagagacaattatggcaacattctgccttgtcccgagcaggtcggagcggtggga
gtgagcaatgtgatatatagaaacattagaggaacaagtgcaagggagttggccataagg
tttgagtgcagcaaaacggttccatgtaaagggattttgctggaaaatgtgaacttaata
ggtgaagaagataaaggagttgttaaagcacaatgttataatgttaagtatgcaattaaa
gggcatgttttccctagttgtggttaa
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