Ipomoea nil (Japanese morning glory): 109181572
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Entry
109181572 CDS
T04663
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109181572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109181572
Spliceosome [BR:
ini03041
]
Common components
Common spliceosomal components
SR proteins
109181572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
DUF6100
Takusan
FAM220
Motif
Other DBs
NCBI-GeneID:
109181572
NCBI-ProteinID:
XP_019186949
LinkDB
All DBs
Position
Un
AA seq
308 aa
AA seq
DB search
MGRLSRTVYVGNLPEDTREREVEDLFYKYGHIVDIDLKIPSRPPGYAFVEFEDPRDAEDA
IRGRDGYSFDGHRLRVELAHGGRGSSSYDHKSTYSGASRGGVSRRSEYRVLVTGLPSSAS
WQDLKDHMRRAGDVCFSQVYRERDGMRGIVDYTNYDDMKYAIKKLDDTLFKNQYSRAYIR
VEKYDSKLSYSGSPNPYYSRSRNYSRSRSPKRHSSESRSVSPRDKSVSRSRSRSISPVRS
ISRSVSRSKSPASPAQGKKHAATSREPSPRRSRSRSLSHPHSVSREPSPSRSRSRSGSLS
HPHSERSV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtttaagcaggaccgtttatgttggcaatctccctgaagatacccgggagaga
gaagttgaagatttgttttacaagtatgggcatattgttgacattgatttgaaaattcca
tcaagaccaccaggttatgcgtttgtagagtttgaagatcctcgtgatgctgaggatgct
attcgtggtcgtgatggttatagctttgatgggcatcgcttgcgggttgaactagcacat
ggtggacgagggtcttcatcatatgatcacaaaagcacctatagtggtgcgagtcgtggt
ggagtttcaagacgctcagaatatcgggttctggttactgggcttccttcttctgcctca
tggcaggatctgaaggatcacatgcgccgagctggagatgtctgtttttctcaagtttat
cgtgaacgggatggcatgagaggaattgtggactatacaaactatgatgacatgaagtat
gcgataaagaaactggatgacactctattcaaaaatcagtactcccgtgcttacatacgg
gttgagaaatatgatagcaaactaagctactccgggagtcctaatccatattactctagg
agcagaaattactcaagaagccggagtcccaaacgccatagcagcgagagcagaagtgta
tccccaagggataaatcagtatctagatcacggtcgaggtctatatctcctgtccgttct
atttcaagatctgtgtcaagatctaaatctccagcatcacctgctcaggggaagaaacat
gctgcaacgagtagagagcccagcccccgccgaagccgaagtaggagcctatctcatccc
cattctgtgagtagagagcccagccccagccgaagtcgaagtcgaagtgggagcctgtct
catccccattctgagagatctgtttga
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