KEGG   Ipomoea nil (Japanese morning glory): 109181579
Entry
109181579         CDS       T04663                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109181579
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ini03019]
    109181579
   03041 Spliceosome [BR:ini03041]
    109181579
Messenger RNA biogenesis [BR:ini03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109181579
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109181579
Spliceosome [BR:ini03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109181579
SSDB
Motif
Pfam: RRM_1 RRM_7 PHM7_cyt Cut8 DUF4311
Other DBs
NCBI-GeneID: 109181579
NCBI-ProteinID: XP_019186960
LinkDB
Position
Un
AA seq 388 aa
MAKKRKASSSATNAQPVEEEEHNPNEEPESEPDSDPSEEEEEDDEEEESGCSEDDEGEDE
ASKRESIRKLLEPFGKDQIIELLKQGASKDPSLLSRIARLADSDPTHRKLFVRGLSWDAT
TEQVLDAFRTYGEIEECKLITDKATGRSKGYAFVLFKTMAAAQKALKQPQKKIGNRTAYC
HLAAAGPTAAAAPDAGSRKIYVANVGPNINVEDLHTFFSKFGEIEEGPVGLDPVTRKPRG
FAIFLYKTAEGARKALEEPFRVFDGCNLYCKKYVENFNNSTNNAAANQPVQQSDSMAYGI
GMNPGILGDGSLFMAQNPGMGLTANPLLGGNYGLNTLNPGMIGNYGSHVALHGLVPFQTA
TPRPASTPPNTRPDFGSAGASFPPYMGH
NT seq 1167 nt   +upstreamnt  +downstreamnt
atggcgaagaaacgaaaggcttcatcctcagcaacgaatgcccaacctgtagaagaagaa
gagcacaaccccaatgaagagcctgaatccgaaccagattctgatccttcggaagaagaa
gaagaagacgacgaggaagaagaatctggttgttcggaagatgatgagggggaagatgag
gcttcgaagcgagagagcatcagaaaactcctcgaaccattcggcaaagaccagataatc
gagctgctcaagcagggagcttcgaaggatccgtctttgctttcgcggatcgctcggtta
gctgactccgacccgacacaccgcaagctcttcgttcgcggcctgagctgggacgctact
acggagcaggtgctggatgctttccggacctacggcgaaatcgaggagtgcaagctcatc
accgataaggccacaggccggagcaaaggctacgcgtttgtactgttcaagaccatggcc
gccgctcagaaagcccttaagcagccgcagaagaagatcggcaaccgcaccgcctattgc
cacctggctgccgcgggccccaccgctgccgccgcgcccgatgccggaagccggaaaata
tatgtcgccaatgtaggccccaacataaacgttgaggatctccatactttcttttccaaa
ttcggcgagatcgaggaaggaccagtcggtctcgatccggtgacgcgtaagcccaggggg
ttcgccatttttctgtataaaaccgcggaaggtgccaggaaagcgctcgaggagcctttc
agggtgtttgatggttgtaacttgtattgcaaaaagtatgtagagaatttcaataacagc
actaacaacgctgctgcaaatcaacccgtgcagcaaagcgattcaatggcttatggcatt
ggaatgaacccgggaatcttaggagatggcagcctgttcatggcacagaatcctggaatg
ggattgacagcaaatcctctacttggaggaaactatggtttgaataccttaaatcccggt
atgataggcaattatggttcacatgtggcactgcacggtttggtgcccttccaaactgca
acgcccaggccagcatccacacctccaaacactcggcccgactttggatctgcaggggca
tccttccccccatatatgggccactag

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