Ipomoea nil (Japanese morning glory): 109181589
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Entry
109181589 CDS
T04663
Name
(RefSeq) TATA-box-binding protein-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109181589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ini03000
]
109181589
03021 Transcription machinery [BR:
ini03021
]
109181589
Transcription factors [BR:
ini03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
109181589
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109181589
RNA polymerase III system
TFIIIB
109181589
RNA polymerase I system
SL1/TIF-1B
109181589
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
109181589
NCBI-ProteinID:
XP_019186975
LinkDB
All DBs
Position
Un
AA seq
212 aa
AA seq
DB search
MADQQPGMEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFA
AVIMRIRDPKTTALIFASGKMVCTGAKSEEQSRLAARKYARIIQKLGFPAKFRDFKIQNI
VGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR
EETYTAFENIYPVLTEFRKNQQWYSIGTFIAA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcagcagccaggaatggaggggagccagccggtggatctttccaaacacccg
tctggaattgtgcccaccctccagaacattgtatcaactgtcaatttggactgcaaattg
gatcttaaatctattgcattgcaagctcgtaatgctgaatacaatcctaagcgttttgct
gctgttattatgaggataagggatccaaaaactacagctttgatttttgcatctgggaaa
atggtttgcactggagcaaagagcgaagaacaatctaggcttgcagcaaggaagtatgcc
cgaatcatccagaagcttggtttccctgccaaatttagggattttaagattcagaatata
gtcggctcctgtgatgtgaaatttcccatcagacttgagggtttggcttattctcatggt
gcattttcaagttatgaaccagaactatttccagggttaatatatcgtatgaagcagcca
aagattgtgcttcttatctttgtgtctggaaagatagtcctcacaggagcaaaggtgcgc
gaggagacatacactgctttcgagaatatttacccagtccttacagagttcaggaagaac
cagcagtggtattctattggaaccttcatcgcggcgtaa
DBGET
integrated database retrieval system