Ipomoea nil (Japanese morning glory): 109181631 Help Entry 109181631         CDS       T04663                                  Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism ini  Ipomoea nil (Japanese morning glory) Pathway ini03040   Spliceosome Brite KEGG Orthology (KO) [BR:ini00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     109181631  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ini03021]     109181631    03041 Spliceosome [BR:ini03041]     109181631    03036 Chromosome and associated proteins [BR:ini03036]     109181631 Transcription machinery [BR:ini03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      109181631 Spliceosome [BR:ini03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     109181631  Complex B     109181631  Complex C    U2 SnRNP specific factors     109181631 Chromosome and associated proteins [BR:ini03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      109181631     TFTC complex      109181631 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st CPSF_A Beta-prop_RSE1_2nd Motif Other DBs NCBI-GeneID:  109181631 NCBI-ProteinID:  XP_019187034 LinkDB All DBs Position Un AA seq 1392 aa AA seqDB search MAVSEEESSSSAPASSSRSRSAAMNGGCYLAKTVLRGSVVLQVVYGHIRFPSSNDVVFGK ETSIELVIIDDDGVVQSICEQPVFGTIKDLAILPWNDRFHSRSSQIHGKDILVVISDSGK LSFLAFCNEMHRFFPLTHVQLSSLGNSRNQIGRMLAIDSNGCFIAASAYENKLALFSVST SCGNDIIDKKICCPPDNHEDIKTVNGVTEICGTIWSMCFISKDLRQPSKEHNPVLAILLN RERTYRNELMLLEWKPKENLLHVIYQYVEAGPFAHHIVEVPHSYGLVILFKAGDAVLMDC KDAHNPYFLYRISLNFTPSVEEQNFVEPTIRIPDIIDEEGMYNVAASALLELSDINKSDP MNIDDDSSTKPGTNYVCSWSWDSANKNNPRMIFSADSGQLFMVEIFSDSDGIKMSLSDCL YKGLPAKELLWVESDFIAAIVEMGDGMVLKLDDGRLVYRSPIQNIAPILDMSVVDYYNEK HDQMFACCGMAPEGSLRIIRSGISVEKLLKTAPIYQGITGTWTVKMKVTDRYHSFLVLSF VEETRVLSVGVSFSDVTDSVGFEPDVSTLACGLMADGLLVQIHKDAVRLCVPIASAHPEG VPLSSPVGGTSWSPNDTRIILGAVGHNVIVVATSSPSFLYVLGLKSLSAYQYELYQLQHV RLQDELSCISIPQKQLEQKPLVSPMSSTNDAPLAAFPAELDLSSTFIIGTHKPSVEVLSF SLDKGLQVIAIGSISLTNTLGTTITGCVPQDVKLVLVDRPYILSGLRNGMLLRFEWPSTS NISVLQSSNLQHFTSSNLENSTTPFTSVNYKAMPTSSSTLFDKMRDSFPIHLQLIAVRRI GITPAFLVPLSDSLDADVIALSDRPWLLQTARHSLSYTSISFQPSTNATPVCSTECPKGI LFVADNSLNLVEMVSSKRLNVQKFNLDGTPRKVLYHSESKLLVVLRTDLSDDSSSDVCCI DPLSGSVVSSFKLDPGETGKCMVLVKYGNDQVMVVGTSRTSGPVIMPSGEAESTKGRLLV LCLEHIQNSDSGSIAFFSRAGSSSQRTSPFCESGGYATEQLSGSSLCSSPDDNSCDGIRL EESEPWQLRLTYSNIWPGAVLAICPFLDRNFVASAGNSFYVCSFTNDHSRQRVRRLVGGK TRFMIMTLTAHLNRIAVGDCRDGIIFYSYREDSRKLEQLYCDPVQRLVADCILMDADTAA VSDRKGSVAILSCLNHSEENSSPESNLAVVSSFYMGEIAMRIRKGSFSYKLPADDVLRGC RDTNGVSDVSQSSIMASTLLGSIITFVPLTRVEYELLEAVQARLVIHPLTAPILGNDHNE FRSRESSAGALRVLDGDMLAQFLELTSMQQEAVLALPLGSHNTIMLNSKPLPAPITVSQV VRLLERVHYALN NT seq 4179 nt NT seq  +upstreamnt  +downstreamnt atggcggtttcggaggaggaatcatcgtcgtcggcgccggcgagtagctccaggtcacga tcagcagctatgaacggaggatgttatttggcgaagacggtgctaagaggaagcgttgtt ctccaagtcgtctatggccacatccgcttcccttcctcaaacgacgttgttttcggcaag gagacatctatagaattggtgatcatagatgatgatggagttgtacaatctatatgtgag cagccagtgtttggcactataaaagaccttgccattctgccttggaatgaccgatttcat tctcgaagctcacagattcatggcaaggacattctggttgttatttctgattcaggaaag ctatcatttcttgcattttgcaatgaaatgcacaggtttttcccattaacacatgttcaa ctctcttctcttgggaattcaaggaatcaaattggaaggatgctagccattgattctaat ggctgtttcattgccgctagcgcatatgaaaacaaattagctcttttctctgtctcgact tcttgtggcaatgatattattgataagaaaatctgttgtcctcctgacaatcacgaggac attaaaactgtaaatggtgttactgaaatctgtggtaccatatggagcatgtgctttatc tcaaaagatctccgccagccaagtaaggagcacaaccctgtattagcaattcttctgaat agggagagaacatataggaatgagctcatgttgttagaatggaaacctaaagaaaatttg cttcatgtgatatatcagtatgtagaagctggaccatttgcacatcatatagttgaagtt ccgcattcttatggactagttatactgttcaaggctggagatgccgtcttaatggattgc aaggatgctcataatccttatttcctatatagaattagtttaaattttactccttcagtg gaagagcagaattttgtggaacctacaattaggattcctgatatcattgatgaagaagga atgtataatgttgctgcctctgccttattggagctcagtgacataaacaaaagtgatcca atgaatattgatgatgatagcagcaccaaaccaggtactaattatgtctgctcatggagt tgggactctgcaaataaaaacaacccaaggatgatttttagtgctgattcaggccaactt tttatggttgagattttttctgattccgatggcatcaaaatgagcttatctgattgcctt tacaaagggctaccagcaaaggagctattgtgggtggaaagtgattttatagcagctatt gttgagatgggtgatgggatggttttaaaattggatgatggcaggctagtttacagaagt ccaatccagaacattgcaccaatattggatatgtcagttgtggactactacaatgagaaa catgatcaaatgtttgcttgctgcgggatggcacctgaagggtcgttacgaattattcga agtggtatcagtgtggagaagttgttgaaaactgctcccatttatcaagggataactggc acttggactgtcaaaatgaaagtcactgatagatatcattcattccttgttctctcattt gttgaagaaaccagagtgctttcagttggggtaagcttttctgatgtaactgattctgtg ggtttcgagcctgatgtcagcaccttggcatgtggtctcatggctgatggtttactggtg caaatacacaaagatgctgttagactttgcgtgcctattgcatctgctcatcctgaaggt gttcccctatcttctcctgttggtggaacatcatggtcgcctaatgatacaagaattatt ttgggtgcagttgggcataatgtgatagttgtggccacttctagtccatcctttttgtat gtacttggtctgaaatcattatcagcttatcaatatgaattgtaccagttgcaacatgta agattgcaggatgagttgtcctgcatttccatccctcagaaacagcttgagcaaaaacca ttagtttcaccaatgagcagcacaaatgatgcccctttggctgcttttccggcagagctt gaccttagtagtacctttattattggtacacacaaaccttcggtagaagtactgtccttt tcgctggataagggccttcaagttattgctataggatccatatcattaacgaacactcta ggaactaccatcactggctgtgttcctcaggatgtaaagcttgtacttgttgatcgaccc tatattctttcaggattgaggaatggtatgctactcaggtttgagtggccttctacctct aatatttctgtgctacagtcatctaatctgcagcatttcaccagttctaatttggaaaat tctactacaccattcacatctgtaaattacaaggccatgcctacttcctcatccacttta tttgataagatgagggacagttttcctattcatcttcaactaattgctgttcgtcgcata ggcatcaccccagcttttttggttccactgagtgactctcttgatgctgatgtaattgca ctgagtgataggccttggctattacaaactgcaagacatagcctttcctatacatccatc tcctttcagccttccacaaatgccactcctgtttgttccactgaatgtcccaagggaatt ctatttgttgctgacaacagtcttaatttggtggagatggtgtctagtaaacggcttaat gtgcagaagtttaaccttgatggcactccacgcaaggtcttatatcatagtgaaagcaag ttattggttgtcttgaggactgacctcagtgatgattcatcctctgatgtttgctgtata gatcctttaagcggatcagtggtatcctcatttaaactggatcctggggagactggtaaa tgcatggtgttggtgaaatatgggaatgatcaagttatggtagttggaactagccgcaca tcaggacctgtaataatgcctagtggtgaagctgaaagtactaagggtcgtttgttagtc ctctgccttgaacatattcaaaattcagatagtggttcaatagcatttttttcgagagct ggatcatcttctcaacgaacttcacccttctgtgaaagtgggggatatgcaactgaacag ctgtctggtagtagcctttgtagcagccctgatgacaacagctgtgatgggattagactt gaagaaagtgagccatggcagttacgtttaacatattcaaacatttggccaggagctgtt cttgctatctgccctttccttgatcgtaatttcgtggcttcagctggtaattctttttat gtatgtagcttcaccaatgatcattctcgtcaaagggtgagacgactagtgggagggaaa acacgattcatgatcatgactttaactgcacacttaaatagaattgctgttggtgattgt agggatggtatcatattctactcatatcgggaggattcaagaaaactggaacagctttac tgtgatcctgtccagcggttagttgctgattgtattcttatggatgctgatacagctgca gtttctgatcgaaaggggagtgttgccatcttgtcctgtttaaatcattcagaagagaat tccagtcctgaaagcaacttagctgtagtttcatcattttacatgggtgaaattgcgatg cggatccgaaaaggctcattctcctacaaacttcctgctgacgatgttttgaggggctgt cgagacactaatggcgttagtgatgtgtcacagagtagcattatggctagcacactgtta ggaagcataattacttttgttcctctgacaagggtggaatatgaactgttagaagcagta caagcaaggcttgttattcatccattgactgctcctatactcggaaatgaccataatgag ttccgcagccgtgaaagttcggctggggcactgagggtacttgatggtgatatgcttgct cagttcttggagctgactagtatgcaacaagaggctgtattagcgctaccccttggctca cataatacaatcatgttaaattcaaagcccttgcctgctcctattactgttagtcaggtt gtgcgtctgctggagcgggttcactatgcactgaattga

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