Ipomoea nil (Japanese morning glory): 109181668
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Entry
109181668 CDS
T04663
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109181668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ini03036
]
109181668
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
109181668
SWR1 complex
109181668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
HDA2-3
Motif
Other DBs
NCBI-GeneID:
109181668
NCBI-ProteinID:
XP_019187086
LinkDB
All DBs
Position
Un
AA seq
2042 aa
AA seq
DB search
MSSKGSKTKPDHETRAKRQKALEAPKEPPRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVAIRASKGVLDQASRGEKRVKEEEQRLRKVALNISKDVKKFWLKIEKLVLYKHQLELD
EKKKKTLDKQLEFLLGQTERYSTMLAENLVSSPTQCQQLNVSSCQEHLRIQHEEGTQDDV
KKNAEAKVESQSVAPDKDDDYDLMSEDESEDDEHTIEEDEALITREEREEELEALKKEMD
LPIEELLKRYHKEQASRGSSLDENGDVPEAIVPREHNAKESDFAITPEIKRVISSASPGR
GCVDSNGVLSVSDNQLSELEAEKHSKPPKELQESDKVHSLDEINDEQFLQDGDDDEDFVA
TFEETECYVDDETTLLEEEELAKAEPNDAKNEIALLKMDCDIPIAELLARYKKDYENDEN
MGGDSESSFASASEEFSDSPTHKESELKNESRDVQPIACPEMEEKEADAVVNSGEEKESE
NRLADAAAAARSAQPTGNTFSTTKVRTKFPFLLKYPLREYQHIGLDWLVTMYEKKLNGIL
ADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS
AKERKIKRQGWLKPNFFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQT
LLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGIVEGQEKV
NKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASAETQAT
LASSNFFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMNGVDVCLSSSICSMFTPGPFSAV
DLIGLGFLFTHLDYSMASWESDDIQAIATPPGLFEGLGNLETGSGLKNKKLHGSSIFEEI
QRELMADRLKEVKERAATLAWWNSLKCKRKPIYSTGLREVVTLKHPIRDIHSQKNNPFSY
CSSLANIVLSPVSRFQQMVDQVESFMFTIPAARAPPPVCWCSKSGASVFFHPTFKERCTE
VLSPLLTPFRPAIVRRQLYFPDRRLIQFDCGKLQELAVLLRRLKSEGHRALIFTQMTKML
DVLETFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGVNLVGADT
VIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQ
SGGYNTEFFKKLDPIELFSGHRTLSSKNAQSEKSSDGTEVPLSNDDVEAALKNAEDEADY
MALKKVEQEEAVDNQEFTEEAIGRMEDDEFGNEEEIKADDTDNIGLTTSNKEKAAVSNGS
DPTVDQAITLAGKDEDVDVLDDVKQMAEAAAAAGQAILSFDSQLRPIDRYAVRFLELWDP
IIDKTAVELQDQFEETEWELDHIEKLKEDMEAEMDDDEEPLVYERWDADFATKAYRQQVE
ALTQIQLMEEMESKAREKELAEYENSIGNDVAASSKPKSKKKTKKTKFKSLKKGGLGSET
KSMKEESPIDLMSTDDEIICQEDVTTPDFVSPHSAQFRKRKQAPDDEESKQMKKSKKIKK
ASEVSPLSLDLSLPGMQQDESIDLKHRERSTIDPELKPLNKSKMGGRVSITMMPVKRIFT
LKPEKLKKKGNLSSKDYFPSADQWLPQEDAILCAAVYEYGPHWRLVSDILYGITGGGLYR
GRFRHPVHCSERFRELIQRYVFSASDVINSERVNNISSGKGLLKVTEENIQTLLDVALEL
PDREPLIQKHFFALLSSVWRSRKNDSCRRSSSQSGFNPLLLTSTANHFSQNSIRPPQGKL
AFTNLSQCNKLVGAALSENSGAQTDNTVSISKQREEAPVPAEGLDITLELQAAKDDNDIS
LPPLVRLKILDPDSPPSLKMRTPEHIHLKSSQYVAESRFRDASNTSFEACLDWPSITLPP
GEPRCKTPAKPQSQGKQKLAPDSAKASKSRSRKVLVEHSDLCPPTEQIFQPTPFSNDPIA
TMDTSSSLEEAGLQHGFETSSLFNTNGEFKVEHIDSVAHDYIPGLLSGLDDCSTFPEFTD
IG
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctaaaggttcaaagactaaacctgaccatgaaacacgtgccaagcgacagaag
gcacttgaagctccaaaagaacctccacgccctaaaacacattgggatcatgttcttgag
gagatggtctggttgtcaaaggactttgagtcagagagaaaatggaaactggctcaggca
aagaaggttgcaataagagcaagcaagggagtgctggatcaagcatcaaggggagaaaaa
agggtgaaggaagaagagcaacgcttgaggaaagtggccctaaatatatccaaggatgta
aaaaaattttggttgaaaattgagaagctggttctttacaagcatcagttagagctcgat
gagaagaagaaaaaaacacttgataaacagcttgagtttcttcttgggcaaactgagagg
tactcaacaatgcttgcagagaacctagttagctcaccaacacagtgccaacaattgaat
gtatcctcttgtcaggagcacttacgaattcaacatgaagaaggaactcaagatgatgta
aaaaaaaatgctgaagcaaaagttgaatctcagtcagttgcccctgataaagatgatgat
tatgatttgatgtctgaggatgaatcagaagatgatgagcatacaattgaggaagatgaa
gctcttataaccagggaagaaagggaagaagagcttgaagccctaaagaaggaaatggat
ctacctatagaggagcttcttaaacgttatcacaaggagcaagctagcagaggaagtagc
ctggatgagaatggtgatgtgcctgaggcaattgtccctagggagcataatgccaaggag
agtgattttgccatcacccctgagattaaaagagtcatatcttctgcaagtcctggtcgt
ggttgtgttgacagcaatggtgttttgtcagtttcagataaccaattgtcagaattggag
gcggaaaagcacagcaaaccaccaaaggaattgcaggagtcagacaaagtgcattcttta
gatgaaattaacgatgaacagtttctgcaggatggcgatgatgatgaagattttgttgct
acatttgaagagactgagtgttatgtggatgatgagacaactctgttggaggaggaagag
ctggcaaaggcagagccaaatgatgctaagaatgagattgcacttttgaaaatggattgt
gacattcctatagctgaactacttgcaaggtataaaaaggactatgaaaatgatgagaat
atgggcggtgactctgaatcttcatttgcatcggcttctgaggagttttctgattcacca
actcacaaagaatctgaactgaagaatgaatcaagagatgtccaacccattgcatgccct
gagatggaagaaaaagaagctgatgctgtggttaattctggtgaagaaaaggaaagtgag
aaccgacttgctgatgcagctgctgctgctagatctgcacaaccaacgggtaatacgttc
tcaacgacaaaagtgcgtactaagttccctttcctcctgaaatatcctcttcgtgagtac
caacacattggattggactggcttgttacaatgtatgagaagaaactaaatgggatcctg
gcagatgaaatggggttggggaagacaatcatgactatcgctcttcttgctcaccttgca
tgtgaaaagggaatatggggccctcatcttattgttgttccaactagtgtcatgctcaac
tgggaaactgagtttctcaaatggtgccctgcttttaaaatactgacatattttggtagt
gcaaaagaacggaagataaagaggcaaggatggttgaaaccaaattttttccatgtgtgc
attacaacttacagacttgtaatacaagattccaaagttttcaagcggaagaagtggaaa
tatttgattctggatgaagctcatcttattaagaattggaaatcacagagatggcagact
cttcttaatttcaactcaaaacgtcgtattcttttgactggtacgccgttacaaaatgat
cttatggagctatggtccctgatgcattttttgatgccgcatatttttcagtctcatcaa
gaattcaaggattggttctgcaaccccatatctggaatagttgaggggcaagaaaaggta
aacaaagaagttgttgatcgcctgcataatgtcctccgccccttcctactccgaaggttg
aaaagagatgtggagaagcagcttcctatgaaacatgaacatgtcatctattgtagactc
tcaaagaggcagcgcaatttgtatgaagacttcattgctagtgctgagacacaagcaact
ttagcaagttcaaatttttttggaatgattagtgttattatgcaacttcgtaaagtctgc
aatcatcctgatctatttgaaggacgccctattgtaagctcttttgacatgaatggtgtt
gatgtttgtttgagttcttccatttgctcaatgtttacacctggccccttttcagctgtt
gaccttattggcttggggtttttatttactcatctggattactcgatggcttcttgggag
agtgatgatattcaagctattgctaccccaccaggcttgtttgagggtcttggaaatcta
gaaacaggatctggattgaaaaataagaagttgcatggttcaagcatttttgaagagatc
caaagggaacttatggcggacaggcttaaagaagtgaaggaacgagcagcaaccctagca
tggtggaattctttaaagtgcaagaggaaaccaatttactccactggtttgcgggaggta
gtcactttaaagcatccaatacgcgatattcacagtcaaaagaataatcctttttcttac
tgctctagtcttgccaatattgtgctctcacctgtttcaagattccaacaaatggttgat
caggttgaaagtttcatgttcacaatccctgcagcacgtgcaccacctcctgtttgctgg
tgcagcaaatctggagcatctgtgttctttcatcctacattcaaggagagatgtactgaa
gtgctttcaccccttctaactccttttcgccctgccattgtcagaagacaactctacttt
cctgataggcgactaattcagtttgactgtggcaagttacaagaacttgcagttctgctg
aggcggttgaaatcagaaggccaccgtgcattaattttcacccaaatgacaaagatgctt
gatgtgttagaaacttttattaatttgtatggttacacttacatgcgccttgatggttcc
actcagcctgaagagagacaaacattgatgcaacgcttcaacacaaatcccaaaattttc
cttttcatcttatcaactcgaagtggaggtgttggcgttaacttggttggtgcagataca
gttatattttatgacagtgactggaatccagctatggaccaacaggctcaagatcgctgc
cacaggatagggcagacacgtgaagtacatatttatcggttaatcagtgaaagcactatt
gaagagaatattctaaaaaaggcaaaccagaagcgtgcacttgatgatttggtcatacag
agtggtggctataacactgagttttttaagaaattggatcctatagagttgttttcaggt
cacagaacactttcatcaaaaaatgctcaaagtgagaaaagctctgatggtacagaggtt
cctctctctaatgacgatgtggaggctgctttgaagaatgctgaagatgaagcagattat
atggcactgaaaaaagttgaacaggaagaggctgtggacaatcaggaattcactgaagaa
gcaattgggaggatggaagatgatgaatttggtaatgaagaggagataaaggctgatgat
actgataatattggccttacaacatcaaataaagagaaggctgcagtctcaaatgggagt
gatccaactgttgatcaagcaatcactttagctggtaaagatgaagatgttgatgtgctt
gatgatgtaaaacagatggcagaggctgccgcagctgcaggccaggcaattttgtccttt
gatagtcaactacgcccaattgatcggtatgctgttcgctttctggagttatgggatcct
atcatagacaagacagcagtggagttgcaagatcagtttgaggaaacagaatgggaattg
gatcacattgaaaagctaaaggaggatatggaagcagaaatggatgatgacgaagaacct
ttagtttatgaaagatgggatgcggattttgcaactaaggcttacagacagcaagttgag
gcattgactcaaattcagttgatggaggaaatggaatctaaagctagggagaaggagcta
gctgagtatgagaattctattgggaatgatgttgcagcttcttctaagcccaagtcaaag
aagaaaacaaagaaaacgaagttcaaatctttgaagaaaggaggcctaggttctgaaaca
aaatctatgaaagaagagtcaccaattgacttgatgtctacagatgatgagattatatgc
caagaggatgttaccaccccagattttgtgtctccacattcagctcaatttagaaagcgt
aaacaagcaccagatgatgaggagtctaaacaaatgaagaagtcaaaaaaaatcaagaag
gcttcggaggtgtctcctttatctctagatttgtcattacctggtatgcagcaggatgaa
tctatcgatttaaaacaccgtgagcggagcacaattgatcctgaacttaagccattaaac
aagagcaagatgggagggagagtatcaattactatgatgcctgtaaagcgcatttttact
ctaaaaccagagaagttgaaaaagaaaggcaacctgtcgtctaaagattacttcccttca
gctgatcaatggttgccacaagaagatgctatattgtgtgcagctgtctatgaatatggc
cctcactggaggctggttagtgatatcttgtatggaatcaccggtggaggattgtacagg
ggcagatttcgccatcctgtgcattgtagtgaaaggtttagggaactcatacagagatat
gtcttttctgcctctgatgttataaacagtgagagagtcaacaatataagctctggaaag
ggtcttctgaaggtaactgaggaaaacatccaaacattgttagatgttgccttggagctg
ccagatcgtgaaccccttattcaaaagcatttttttgcccttctatcttctgtctggagg
tccaggaaaaatgattcatgcaggcgatcatcttcacaaagtggtttcaaccctttgctg
ttgacatcaactgccaatcatttctctcaaaattccattagaccaccacagggaaaattg
gcatttactaacctaagtcaatgtaacaagttagtaggagctgcactttccgagaactct
ggtgcacagactgataatacagtctctatctctaaacagcgggaggaagcccctgttcct
gcagaggggttggatattactcttgaacttcaggcagcaaaagatgataatgacatttct
ttgccacctcttgtgcgtcttaaaatacttgatcctgattccccaccatctttaaaaatg
cgaacacctgaacatattcacttgaaatcttctcaatatgtagctgaaagccgattcagg
gatgcatcaaatactagctttgaagcttgtttggattggccatcaattacattgcctcct
ggggagccaaggtgtaaaacgccagcaaaaccgcaatctcaaggaaagcaaaaactcgct
cctgattcagcaaaggcttccaaatcaaggtcgagaaaggttctagtcgagcatagtgat
ttgtgtccacccaccgaacaaatattccaaccaacaccattttccaacgaccccatcgca
accatggacacctcatccagcctcgaagaagccggtctccaacacggctttgaaaccagc
tctctgttcaacacgaacggggaatttaaagtggagcatatagattccgtggcccacgat
tacattcctggcttattatccggactagacgattgttcaactttcccagaatttacggat
attggttag
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integrated database retrieval system
