Ipomoea nil (Japanese morning glory): 109181716
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Entry
109181716 CDS
T04663
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109181716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109181716
03036 Chromosome and associated proteins [BR:
ini03036
]
109181716
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109181716
Coactivators
SAGA/TFTC/STAGA complex
109181716
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109181716
STAGA complex
109181716
TFTC complex
109181716
SAGA complex
109181716
SLIK complex
109181716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
109181716
NCBI-ProteinID:
XP_019187156
LinkDB
All DBs
Position
Un
AA seq
540 aa
AA seq
DB search
MEQPPPPPQAPPNEQQLPPQQQLPPLPSAALPPPPLTSSSAAPSSLSLPASSLPPPAATE
TVRSPNPNLNPATTSPALNIPQSRPASQPSSSFSRPWQQPSPFQHFSLPPPPPPPGPHSA
SASATPSSSSLSMPPPPRGGMALGVPAHHPGPPPPPASFSSLAPPSFGQQFGGLGRNVPD
SVPTSNSSQVRQPIQGMQGVGIMGAIGSSSAIRAAGVPQHPLRSITSSLRAQAVPQSPGS
QNFQGHGMLRVQSVGSPISPGASQNPQSQNQPWLSSAAQGKPPLPPPSLRPQMSPQLLQQ
RSHIPPQHHHTMPTASPQQQHTSSAQQSQPSSSVPVPENLAQQVQPSRNQPSFPNQPPIA
RGQGLGIQRPPSLATLQPGSVQAGSLHRPAAVETEEPCNRILSKRSIQELVTQIDPSEKL
DPDVEDILVDIAEDFVESITTFGCSLAKHRKSSVLESKDILINVERNWNISLPGFSGDEI
RTYKKPFTTDIHRERLAVIKKSVATAEASNSKSGAGQGGNLKSHTGKAPANIMSPPNTKT
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaccaccaccgccgccacaggcgccgccaaatgagcaacaacttccgccgcaa
cagcaactaccgccgctaccatcagctgcgttgccgccgccgcctcttacatcctcctcc
gctgcaccgtcctcgctttccttacccgcctcttcactccctcctcctgcggcgacggag
accgtgcgttctcccaacccaaacctaaaccccgccaccacatcccccgctctcaatatc
cctcaatcaaggccggcatcgcagccatcgtcgtccttttcccggccatggcagcagcca
tcgccattccagcacttctcattgcctcctcctccgcctcctccggggccgcactctgcc
tccgcctccgccactccttcgtcttcttcgctatcaatgccgccgccgcctaggggcgga
atggcgcttggtgtccctgcccatcaccccgggcctcctccccctcccgcctcgttttcg
tccttggctccgccttcctttggccaacaattcggtggattgggccgcaatgtgcctgat
tctgtgcctacttcaaactcatcccaggtgagacagccaatacaaggaatgcaaggagtg
ggaattatgggtgccattggttccagttcagcaataagagcagctggggttcctcaacat
ccattgagatcaattacctcatctcttagagcacaggctgtccctcagtctcctggttca
caaaattttcaaggacatggcatgctgagagttcaatcagtgggatctccaatttctcct
ggtgcttctcagaatccacagtcccagaatcagccttggttatcttcggctgcacaaggg
aagcctccgttgccacccccctcgttgaggcctcagatgagcccacagttattgcagcaa
cgatctcatattcctccacagcatcaccataccatgcctactgcctctccgcagcaacag
catacatcttctgcccaacagtcacagccttcaagttcagttccggttcctgagaatttg
gcacagcaagttcaaccatcaaggaatcaaccgtctttccccaatcaaccaccaattgca
aggggtcaagggttgggaattcaaaggcccccgtctcttgcaacgctgcaacctggttct
gttcaggctggatcgcttcatagacctgctgctgtggagaccgaggagccttgtaatagg
attctgagcaaacgaagcatccaggagctcgtgactcagattgatccctcggagaaattg
gatcctgacgttgaggacatccttgtagatattgctgaggacttcgtggaatctattaca
acctttggttgctcattggcaaaacaccgaaaatcctctgtgctagaatcgaaggacatc
cttataaatgttgaaaggaactggaacatatctcttccggggtttagcggggatgaaatt
aggacctacaagaaaccattcacaactgacattcaccgagagcggcttgctgttatcaag
aaatcagtcgccactgcagaggcatcgaattcaaagagcggggctgggcaaggtggaaac
ttgaagagccatacgggaaaagcacctgccaatattatgagtccccctaacacaaaaacc
taa
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