Ipomoea nil (Japanese morning glory): 109181971
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Entry
109181971 CDS
T04663
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03018
RNA degradation
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109181971
09123 Folding, sorting and degradation
03018 RNA degradation
109181971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109181971
03041 Spliceosome [BR:
ini03041
]
109181971
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109181971
mRNA degradation factors
5'-3' decay
Lsm complex
109181971
Spliceosome [BR:
ini03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109181971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
109181971
NCBI-ProteinID:
XP_019187503
LinkDB
All DBs
Position
Un
AA seq
145 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGRGRDDGAAGRQGKGIGRGMDD
GGAKGRGRGGPGVKAGGKGGGRGRG
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgcttccactctctctcctcaaaactgcccaggggcatcccatgctggtggagctgaaa
aatggggaaacttataacgggcatttggtcaattgtgatacttggatgaatattcatctc
cgcgaagtcatctgtacatcgaaggatggagataggttctggagaatgccagaatgttat
attcgtgggaatacaattaaatatcttcgagtcccagatgaggtgattgataaagttcaa
gaagaaacaaaaagccggacagacaggaagccacctggtgtcgggcgtggcaggggaaga
ggtagagatgatggtgctgctggcagacagggaaaaggaattgggcgtggaatggatgat
ggaggtgccaaaggccgtgggagaggaggtcctggtgtcaaggctggtggaaaaggtgga
ggtcgtgggcgtggctaa
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integrated database retrieval system
