Ipomoea nil (Japanese morning glory): 109182502
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Entry
109182502 CDS
T04663
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ini03016
]
109182502
Enzymes [BR:
ini01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
109182502
Transfer RNA biogenesis [BR:
ini03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
109182502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_25
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
109182502
NCBI-ProteinID:
XP_019188172
LinkDB
All DBs
Position
Un
AA seq
434 aa
AA seq
DB search
MEGRCMLWLPKKNRFCANTPLQNSPFCGNHTERSDGQWIPCPIDPSHSVLEENLESHLKR
CPLLKQTQSLSLQPFYEKGINAGTDSSTIGVSNITSEMKRNAVYAMTVAEFSKLISKIKC
IHASICTRIPDSFKNPQACGIWTNRQVDRKLPFEEKHVLQQASILGNLEEFGVLKDSSAL
PTVVEFGAGRGYLTQVLTDCYGFKKVLLVERKSYKLKADRSLRQKEGLTLERLRIDIEDL
KLKAVESLRGAPYLAIGKHLCGPATDMTLRCCTKDQCEGQAILDSPESSCYLTGLAIATC
CHHLCQWRHYINTEYMLNLGISMEDFHAVTWFTSWAVDADHTSDLNGSDCTTDLQISEME
SCELDGDVDPKGVEGVIRNMKGVDRAALGFMCKDIIDAGRMAWLKEVGLECQLVKYVPST
ISPENHLLVARQKC
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtcggtgcatgttgtggctacccaagaaaaataggttttgcgcaaatactcct
ctccaaaactcacctttctgcggaaaccacacggaaagatccgacggccaatggattcct
tgtccgatcgacccttctcactctgtgctagaagagaatcttgaaagtcacctaaagagg
tgtccacttctgaagcaaacacaatctttgtctctccagcctttctatgaaaagggcatc
aatgctggtacagacagtagtactattggagtgtccaatattacatctgaaatgaagaga
aatgctgtttatgccatgactgttgctgaattctccaaattaatcagtaaaatcaagtgc
attcatgcttccatttgcactcgcattcctgattctttcaagaatccacaagcttgtggc
atttggaccaatcgacaagtggaccgcaagttgccatttgaagaaaagcatgttttgcag
caggcatccatcctagggaatcttgaagagtttggagttctgaaggattctagtgctctc
cctacagttgttgaatttggtgctggaagggggtatttgacacaagtattgacagattgt
tatggatttaagaaggtcttgttggttgagcgcaagtcgtacaagcttaaggctgatagg
agtttgcgacagaaagaggggttaacattggagcggttgagaattgacattgaggaccta
aagttaaaagctgttgaatctttacgaggagcaccttatttggcaattggcaaacatctt
tgtgggcctgcaacagatatgacattaaggtgttgcacgaaggaccaatgtgagggtcaa
gctattcttgattcacctgaatccagttgctatctcactggcttagctattgctacatgt
tgccatcatctttgccaatggaggcactatataaatacagaatatatgttgaatttgggt
attagcatggaagacttccacgcagtaacatggtttaccagttgggctgttgatgcagat
catacttcagatctcaacggttctgattgcactacagacctacaaatcagcgagatggaa
tcatgtgaattagatggagatgtggatccaaagggagttgaaggcgtcataaggaatatg
aagggcgtggatagggcggctttggggttcatgtgcaaagatataattgatgctgggagg
atggcttggctcaaggaagttggacttgaatgccagcttgttaagtatgttccctccacc
atctctcctgaaaaccatttgttggttgccaggcaaaagtgctaa
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