Ipomoea nil (Japanese morning glory): 109182773
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Entry
109182773 CDS
T04663
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109182773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109182773
Spliceosome [BR:
ini03041
]
Common components
Common spliceosomal components
SR proteins
109182773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_7
Motif
Other DBs
NCBI-GeneID:
109182773
NCBI-ProteinID:
XP_019188505
LinkDB
All DBs
Position
Un
AA seq
312 aa
AA seq
DB search
MSRSSRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKLPPRPPGYAFVEFKDAHDADDA
IRGRDGYDFDGHRLRVELAHGGRGHSLSNDRHSSHSSSGRGPRGGVSRRSDYRVLVTGLP
SSASWQDLKDHMRRAGDVCFSQVFREGSGMSGIVDYTNYDDMKHAIKKLDESEFRNAFGR
AVIYVKEYNSGRSRSRSRSRSRSRSYSGGKNGSRSRNRSRSYSRSRSRSKSPKAKSSRRS
RSRSKSPSRSPSRSKGRSMSRSLSRSRSPVPSRKKEVSESPKKRSSSPKKRSSSPKKRSS
SRSRSRSRSLSR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctctagcaggactctctatgttggtaatcttcctggagatattcgtgagcgg
gaagttgaggatttgttttacaagtatggaccaattgcacatattgatttgaaacttcct
ccaagacctcctggttatgcttttgttgagtttaaagatgctcatgatgctgatgatgct
attcgtggtcgtgatggctatgattttgatgggcatcggttgcgggttgagctggcccat
ggtggtcgtggtcactcactctctaatgatcgccacagtagccacagcagcagtggtcga
ggtcctcgaggaggagtgtcaaggcgttctgactatcgagtgttagtcactggattgccc
agttctgcttcatggcaagatcttaaggatcacatgcgtcgagctggggatgtttgtttc
tcccaagtttttcgtgaggggagtgggatgtctgggatagtggactacaccaactatgat
gatatgaagcatgctataaaaaaacttgatgagtctgaatttcggaatgcatttggacgt
gcagtaatatatgttaaggaatacaattcaggtcgctcaagaagccgaagccgcagtcgc
agccggagtcgttcttattcaggaggaaagaatggcagccgtagtcgtaatcgaagccga
agttatagtcgtagcaggagcagaagcaaatctcctaaagccaaatcttctcgacgttca
agatctcgttcaaagtctccatcacgatccccttctaggtcaaaaggacgctctatgtca
agatctttatcaagatccaggtccccagtgccttctcgtaagaaagaagtcagtgaaagc
ccaaagaaacggagttctagcccaaagaaaaggagttctagcccaaagaaacggagttct
agccgcagccgcagccgcagcaggagtttatccaggtaa
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