Ipomoea nil (Japanese morning glory): 109182862
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Entry
109182862 CDS
T04663
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109182862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109182862
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109182862
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
DUF7885
LRR_4
F-box-like
LRR_NXF1-5
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
109182862
NCBI-ProteinID:
XP_019188632
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All DBs
Position
Un
AA seq
581 aa
AA seq
DB search
MAYSFLDEVLEHVFSFLTSDRDRNAVSLVCKSWYDVERWCRRRVFVGNCYAVSPEIVIRR
FPEVRSVELKGKPHFADFNLVPEGWGGFFHPWVEAMARVYPWLEEIRLKRMVVTDETLEL
ISRSFKNFKVLSLSICEGFTTDGLAAIAANCRNLKELNLRESDVEDLSGHWLSHFPDNCT
SLVSLDITCLGSEVSFSALERLVARCPNLRTLRLNRAVPLEKLPNLLRCTPQLVELGTGG
YTAEVRPDVLSNLADAFAGCKQLKGLSGFWDVVPAYLPAMYSVCPGITSLNLSYAIIQSP
DLIKLVSLCCNLQRLWVMDYIEDTGLEALAASCKDLQELRVFPSDPYAVEANVDLTEQGL
VAVSKGCPKLQSVLYFCRRMTNAALATIAQNNPNFIRFRLCIIEPRAPDYVTCEALDTGF
GAIVKHCKELRRLSLSGLLTDRVFEYIGTYAKKLEMLSIAFAGDSDLGLNHVLSGCESLR
KLEIRDCPFGDDALLANAAKLETMRSLWMSSCSVSFGACKMLAKKMPGLNVEVIDESDPP
GSRLESIPVERLYIYRTVSGPRFDKPAFVWMMDNDATPRCS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcctttctcgacgaagtgctggaacacgtcttctcgtttctcacctccgac
agggaccggaacgcggtctccttggtgtgcaagtcgtggtacgacgtcgagaggtggtgc
cggaggagggtgttcgtcgggaactgttacgccgtcagccctgagatcgtgatccgccgt
ttcccggaggtccggtcggtggagctaaaggggaagcctcatttcgcggacttcaatctg
gtgccggagggttggggagggtttttccacccctgggtggaggcaatggcgcgagtttac
ccttggcttgaggagattaggctaaagagaatggtggtcacggacgagaccttggagttg
atctctaggtcttttaagaacttcaaggtcctttcgctctccatttgtgagggcttcact
actgatggccttgctgccattgccgccaattgcaggaatttgaaagagctaaacttgagg
gagagtgacgttgaggacctgagtgggcattggctgagtcatttccctgataactgcaca
tctctagtgtcacttgacattacttgcttgggctctgaggtgagtttctcggcacttgag
cgcctggttgcacggtgtcctaatctgaggactcttcgcctcaaccgtgctgtgccactt
gagaagcttcccaacctacttcggtgtactccccagttggttgagttgggtacaggtggc
tacactgctgaggtccgccctgatgtcttgtcaaacctggcagatgcttttgcaggctgc
aagcaacttaaaggcttgtctgggttttgggacgtggttccagcttaccttccagcaatg
tattcagtctgccctggaatcacctctttgaatttaagctatgctattattcaaagccct
gatcttatcaagcttgtaagcctgtgttgcaatttgcaacggctatgggtgatggattac
attgaagatacggggcttgaggcccttgctgcatcttgtaaggaccttcaagaacttagg
gtgtttccttctgacccctatgctgttgaggcaaatgtagatttaacggaacaaggcctt
gttgctgtttctaagggttgccccaaactgcagtcagtattatacttctgccgccgaatg
acaaatgctgcattggcaactattgctcagaataatcctaattttatccggttccgtctt
tgcataattgagcctcgggctcctgattacgtgacctgcgaagcacttgatactggtttt
ggagccattgtaaaacactgcaaagaattgcggcgactttccctctctggcctcctcact
gatcgggtgtttgagtatattgggacttacgcgaagaagttagagatgctttctatagcc
tttgctggggatagtgacttgggcctcaaccacgtgctgtcaggttgtgaaagcctccga
aagttggagataagagactgcccatttggggatgatgctctcttagccaacgctgcaaag
ctggagacaatgcgatccctttggatgtcttcttgttcggtaagttttggagcatgcaag
atgctagctaagaagatgcccgggcttaacgttgaagttatagatgaaagtgaccctcca
ggttcaaggctggaaagcattcctgttgagagattatacatataccgaacagtttcagga
cctaggttcgataagcctgccttcgtttggatgatggataacgatgcaacaccaaggtgt
tcttga
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