Ipomoea nil (Japanese morning glory): 109182884 Help Entry 109182884         CDS       T04663                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism ini  Ipomoea nil (Japanese morning glory) Pathway ini03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ini00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     109182884  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ini03400]     109182884 DNA repair and recombination proteins [BR:ini03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      109182884 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor nSTAND_NTPase5 Tudor_KDM3B YL1 Motif Other DBs NCBI-GeneID:  109182884 NCBI-ProteinID:  XP_019188664 LinkDB All DBs Position Un AA seq 1300 aa AA seqDB search MASRRPSNGRSPLVNQQRQITAFFTKKTSSTPSPSRSPSSLPTKQSQTFKKTSPNPNPSP ATAPPLGSKSNKPLLVIGPSPTPDSTESSYGQEVLNRRIKVYWPLDKCWYEGCVKSFDKI SGKHLVQYDDEEEEMLNLSQERIEWIETPVVTKFRRLRRLKVVDDEKEEELDGIESGGDD SEDEDWENNANEEAEEDEGCPADMDLEAEDDDIDDNGLRRGKSGISKKAELRKRKFTEGL KLVSTKAKKIKSGGNNKSTQSKAPTATGGVKVIESVTNNLECVKASNGDDILTGNSAERF SMREMEKLGFLGKGRRDADRRRPGDVNYDSRTLYLPSDFLKGLSGGQRQWWEFKSKHMDK VLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPEKNFSMNAEKLARKGYRVLVV EQIETPEQLELRRKKGSKDKVVKREICAVITKGTLTEGEMLTVSPDASYLIAVTESCQTS ANQLGERTYGVCVVDVATSKVILGQFADDSDCSSLCSLLYEFRPVEIIKPAKLLSHETER VLHRHTRNPLVNELVPLSEFWDAEKTISEVKNMYQRLNNTPIPYSQNEADLHPSESIDND AQLRNLPNVLSELVNAGENGTYALSALGGTLFYLKQAFLDVSLLKFAEFELLPFSHFGMI AQKPYMVLDAAALENLEIFENSKNCGSSGTLYAQMNHCVTAFGKRLLRTWLARPLYHLEA IKERQDAVAGLKGVNLPGVLEFRKELSRLPDMERLLAQIFASSEANGRNANKVVLYEDAA KKQLQQFISALRGCETMVNACFSLGATLDNTDSKLLHDLLTPGKGLPDVKLVIKQFKDGF DWVEANSSGRIIPCEGVDEEYDAACGSLRKVELSLAKHLKEQQKLFGDTSINYVTVGKDA YLLEVPESLCELVPQEYELQSSKKGYFRYWNPVIRKLMGELSQAETERESKLKSILQRLI GRFCEHHSTWRELISTIAELDVLISLSIASDYYEGPTCRPHIRELPSQDNVPCLVAKSLG HPILRTDSLDKGAFVSNDVTLGGAGHSSFILLTGPNMGGKSTLLRQVCLAVILAQVGADV PAASFDLSPVDRIFVRMGAKDHIMAGQSTFLTELLETASMLSSATRNSLVALDELGRGTS TSDGQAIAESVLEHFVHKVQCRGMFSTHYHRLAIDYQEDRQVSLCHMACHIGEGLGGLEE VTFLYKLTLGTCPRSYGVNVARLAGLPDNVLEKAAAKSREFEGVYGNNKGSRGNSSKNWD EKAIEVIRSLMHLADYNERHGGKAIELLSDLQYRAKVLLE NT seq 3903 nt NT seq  +upstreamnt  +downstreamnt atggcgtcccgccgaccgagcaatggcagatcaccattagtcaatcaacagcggcaaatc acagctttctttaccaagaaaacatcgtccacaccttccccttctcgttcaccgtccagt cttcccactaagcaaagccaaacatttaagaaaactagcccgaaccctaaccctagcccc gccacggcgccgcccctcggttccaagtcgaataaacctctcttagtcatcggaccatct ccaacccccgattctactgagagttcatacgggcaagaggtcctgaacaggaggattaag gtttattggcctttggataaatgttggtatgaagggtgcgtaaaatcttttgacaagatt tcgggtaagcatttggttcagtatgacgatgaggaggaggagatgctgaatctttctcag gaaaggattgagtggattgagacgccggtggtgacaaagtttcgtcgattgcggcggctt aaagtggtagacgatgagaaggaagaggagttggatggtattgagagtggtggagatgac tccgaggatgaagattgggaaaacaatgctaatgaagaagcagaggaggatgaaggttgc ccagctgatatggatttagaggctgaggatgatgacattgatgataatggattaagaagg ggaaaatctggaatcagcaagaaagcagaattgaggaagaggaaatttactgaagggctt aagttggtttctaccaaggcgaaaaagattaaaagtggtggaaataacaaaagcactcaa tcgaaggcacctactgctactggtggagtaaaggtcattgaatcagtgacaaataatctg gagtgtgtgaaggcatccaatggtgatgatattttaactggcaattcagcagaaagattt agcatgcgtgaaatggagaagttgggctttcttgggaagggcaggagggatgcagataga aggcgccctggagatgtcaattatgattcaaggactctttaccttccttctgacttttta aagggtctaagtggtggccagagacaatggtgggaatttaagtcaaaacacatggacaaa gttctttttttcaagatgggaaagttttatgagctttttgaaatggatgcacatattgga gccaaagaattagacttgcagtacatgaagggagaacaacctcattgtggatttccagaa aaaaacttctcaatgaatgcagagaaactggctcggaagggttacagggttcttgtcgtt gaacaaatagagacacctgaacaacttgagcttcgtcgtaaaaagggctctaaagataag gtcgtgaaacgtgagatatgtgcagttatcacaaaaggaacattaactgaaggtgaaatg ctcactgtaagccctgatgcttcatatcttattgctgtgactgaaagctgccaaacatct gcaaaccagctaggggagcggacttatggggtctgtgtggttgatgttgctacgagcaag gttattcttggacagtttgcagatgattcagattgcagttccctctgtagtctgttatat gagtttagaccagtggaaataataaagcctgccaagttgcttagccatgaaacagagcga gtactgcatagacatacaagaaatccactagtgaatgaattggttcccctctctgaattt tgggatgctgagaaaaccatatccgaagttaagaatatgtatcaacgtcttaataataca ccaattccatattctcaaaatgaagcagatttgcatcccagcgagtccattgataacgat gctcaattgagaaatttaccaaatgtgctgtctgagcttgttaatgcgggtgagaatgga acgtatgccctttcagctcttggaggaactctattttatttgaagcaagcttttctagat gtgagcctactcaagtttgcggagtttgagttactcccattttcccattttggcatgatt gctcaaaaaccatatatggttcttgatgctgctgcacttgagaaccttgagatatttgag aatagcaaaaactgtggttcttcagggactttgtatgctcagatgaaccattgtgtgaca gcatttggaaaaaggctacttagaacatggcttgcaagacctttatatcatctggaggca attaaagaacgccaggatgcagtagcaggactaaagggagttaatttacctggtgtactt gagtttagaaaagagttatcaagacttcctgacatggaaaggctgcttgcacaaattttt gctagcagtgaagctaatgggagaaatgcaaataaagtggtactatatgaggatgctgca aagaaacagctacaacagtttatatcagctttgagagggtgtgaaacaatggtgaatgca tgcttttcacttggcgcgactttagacaacacagattcaaagctgttacatgatcttcta acacctggtaaaggacttccagatgttaaattagttataaagcagtttaaagatggtttt gattgggtggaagcaaatagttcaggtcgtattatcccttgtgaaggggttgatgaggag tatgatgctgcatgcggatcccttaggaaggttgaacttagtctggcaaagcacttgaag gaacaacaaaagctgtttggagatacatcgattaattatgtcacagttggaaaggatgca tacctcttggaagtgccagaaagtttgtgtgagctcgttcctcaggagtacgaattgcaa tcatccaaaaagggttatttccggtattggaatccagttataaggaagttaatgggagag ctttctcaggctgaaactgagagagagtccaagttgaaaagtatattacaaaggcttatt gggcgtttttgtgagcatcatagtacatggagagagctaatttctactattgcagaactg gatgttttgatcagtttatccattgctagtgattattatgaagggccaacatgtcggcca catataagggaattgccctctcaggacaatgttccatgccttgttgctaaaagcttagga catcctattcttagaactgattctctggataaaggagcatttgtctccaatgatgttaca cttggtggtgctggacattcgagttttatcttgctaactggtcctaatatgggaggaaaa tctactcttttgcgccaagtttgcttagctgtgattttggcacaggttggagctgacgta ccagcagcatcttttgacctgtcccctgtggacaggatctttgttcgaatgggtgctaaa gatcatattatggctggccaaagtactttcttgacagaactcttagaaactgcatctatg ctgtcgtctgcaacccgaaattcacttgttgcactggatgaacttggccgaggaacatca acttccgatggacaagcaatagctgagtcagttcttgaacattttgttcacaaggtgcaa tgtagaggaatgttttctactcattatcatcggttggccattgactatcaggaagatcgt caggtctcgctgtgtcatatggcatgccacattggtgaaggattaggaggtttggaggaa gttacgtttctctataagttgacattaggcacatgccccagaagttatggtgtgaatgtt gcacgcctggctggacttcccgataatgtacttgaaaaggctgctgcaaagtctcgagaa tttgaaggggtatatggcaacaacaaaggatcgagaggaaattcgagtaagaattgggat gaaaaggcgatagaagtcatccggagcttgatgcatcttgctgattacaatgaacgccac gggggtaaggctattgaattattgagtgatttacaatatagagcaaaggtgctcttagaa taa

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