Ipomoea nil (Japanese morning glory): 109183356
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Entry
109183356 CDS
T04663
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109183356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109183356
03110 Chaperones and folding catalysts [BR:
ini03110
]
109183356
03029 Mitochondrial biogenesis [BR:
ini03029
]
109183356
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ini04147
]
109183356
Enzymes [BR:
ini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109183356
Messenger RNA biogenesis [BR:
ini03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109183356
Chaperones and folding catalysts [BR:
ini03110
]
Heat shock proteins
HSP60 / Chaperonin
109183356
Mitochondrial biogenesis [BR:
ini03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109183356
Exosome [BR:
ini04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109183356
Exosomal proteins of other body fluids (saliva and urine)
109183356
Exosomal proteins of breast cancer cells
109183356
Exosomal proteins of colorectal cancer cells
109183356
Exosomal proteins of bladder cancer cells
109183356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Nuc_N
Motif
Other DBs
NCBI-GeneID:
109183356
NCBI-ProteinID:
XP_019188982
LinkDB
All DBs
Position
Un
AA seq
591 aa
AA seq
DB search
MASANAISTASILSSPSNRGGLRSGRRTSQLQGRSFNPKTSNSKNRFVVRANAKEIAFDQ
KSRTALQAGIDKLADAVGLTLGPRGRNVVLDEFGTPKVVNDGVTIARAIELADPMENAGA
ALIREVASKTNDSAGDGTTTASVLAREMIKLGLLSVTSGANPVSIKRGIDKTIQGLVDEL
ENKARPVKGRDDIKAIASISAGNDEAIGTMIADAIDKVGPDGVLSIESSSSFETTVHVEE
GMEIDRGYISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIA
EDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEYQATDLGLLVEN
TQVEALGIARKVTITKDSTTIIADAASKDEIQSRIAQLKKELNETDSIYDSEKLAERIAK
LSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTHVPAIKD
KLEDADEKLGADIVQKALLAPASLIAQNAGVEGEVVVEKLKDSEWETGYNAMTDTYENLV
EAGVIDPAKVTRCGLQNSASVAGMVLTTQAIVVEKPKPKAPAPAAPQGLTV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcaaacgccatctcaactgcctcaatcctctcctcaccttccaatcgaggg
ggtttgaggagtggtaggaggactagccagctgcaggggaggagtttcaaccccaagacg
tcgaactcgaagaatcggtttgtggtgagggctaatgccaaggaaattgcttttgaccag
aaatccaggaccgctcttcaggccggcatcgataagctcgctgatgccgtcggactcact
cttggacccagggggaggaatgttgtgttggacgaatttggaactccaaaagttgttaat
gatggagtgacaattgctagagctatagagcttgctgatcctatggaaaatgctggtgca
gcccttattagggaggttgcaagcaaaaccaatgattcagctggtgatggaacaacaact
gcatcagttcttgcacgtgaaatgatcaaacttggtctcttgagtgttacatctggtgca
aacccagtgtccataaagaggggcattgacaaaactatacagggtttggtggacgagctt
gaaaataaagctagaccggttaaaggtcgagatgatatcaaagcaattgcttcaatttca
gctggaaatgatgaagccattggtaccatgattgctgatgcaattgacaaagttggtcct
gatggtgtgttatctattgagtcatcatcttcctttgaaactacagtccatgtagaagag
ggaatggagattgatagaggatatatttcccctcaatttgtcaccaatcctgagaaattg
attgttgagtttgaaaatgccagagttttaattacagatcaaaagatttctgcaatcaaa
gacattattcccttgttagaaaaaaccactcaattgcgagctccacttctcattattgct
gaagatgttactggggaagccttggctactcttgttgtcaacaagctgagaggcattctg
aatgttgctgctattaaagcacctggttttggtgaaaggagaaaggcacttcttcaagat
attgccattgtaacaggagctgagtatcaggctactgatttgggactgcttgtggagaat
acacaggttgaggcactaggtattgcccgaaaagtgaccattacaaaggactcaacaacc
atcattgctgatgctgcttcaaaggatgagatacaatcaaggattgctcagcttaaaaag
gaattaaatgaaacagattcaatatatgattctgagaagcttgctgagagaattgccaaa
ttgtccgggggtgttgctgtaattaaagtcggagcagcaacagaaactgagcttgaggac
cgcaagctccgcattgaggatgcaaagaatgcaacttttgctgctattgaggagggcatt
gttcctggtggtggtgctgcattagttcatctatcaactcatgttcctgcaattaaggat
aagcttgaagatgcagatgagaaattaggtgctgacattgtgcaaaaggcattattagca
cctgcatctttgatagcccaaaatgctggggttgagggtgaggtagttgtggagaagctg
aaggacagtgaatgggagactggctacaatgcaatgaccgatacctacgagaatctcgtt
gaagctggagttattgatccagccaaggtgacaagatgcggtctgcagaactctgcatca
gtagcaggaatggtgctcaccacccaagccattgttgtggagaagccaaaacctaaggca
cctgcgcccgcagctccacaaggcctcactgtgtga
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