Ipomoea nil (Japanese morning glory): 109184034
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Entry
109184034 CDS
T04663
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Module
ini_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109184034
Enzymes [BR:
ini01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109184034
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
CX
Motif
Other DBs
NCBI-GeneID:
109184034
NCBI-ProteinID:
XP_019189620
LinkDB
All DBs
Position
Un
AA seq
410 aa
AA seq
DB search
MYFFSSSCTMNSFAVILIIGLVSSRIASQVVGSSFNVLDYGATGDGSTDDSQAFLNAWKD
ACSSAAGSPLLIIPQNLKFLVHPITFSGPCNSEKINFAIMGTILAPASPSIWGDGDPSQW
LAFQDVTGLNIYGSGTIDGQGKVWWDQSCRDHPGLEGCKGLAPTALKLISCNEGSLSNIM
FSNSPQSHVLIYGCNDFRVDSVAIQSPEDSPNTDGIHIQSSHQLSITNSKISTGDDCVSI
GDYTSNVEINFLSCGPGHGISIGSLGKSGNEVQVENIHVSNAFLYGTTNGARIKTWQAGK
GYVRNVIFENLILHTVNNPIIIDQHYCDDPGACQETGSGVQISDVTFRNIYGTSGTDVTV
NLNCSKVVPCKDIHLQFVQLAAAQPGNLATASCNNAYGQEFIVVPGPCLI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtatttctttagctcttcatgtaccatgaattcttttgctgtaatattgattattggc
ttagtttcttcaagaattgcttcccaggttgttgggagcagtttcaatgtcctggattat
ggagctactggggatggcagtacagatgattcacaggcatttttgaatgcatggaaagat
gcatgctcttcagctgcaggatctcccctactcatcatccctcaaaacctcaagttcttg
gttcatccaatcacttttagtggcccttgcaattctgagaaaattaattttgcgataatg
ggaacaattttggctcccgcctcaccaagcatatggggagatggggatccaagccagtgg
ctcgcattccaagacgttaccgggctcaacatctatggctcgggaacaattgatggacaa
ggaaaagtctggtgggatcaatcttgtcgagatcatccgggtttggaagggtgcaaaggc
ttggccccaactgcattaaagctgatttcttgcaatgaagggtctctcagcaacattatg
ttcagcaacagtcctcaatctcatgtactcatctatggctgcaatgattttagggttgac
agtgtagccatacaatctcccgaagacagtcctaacaccgatggcattcatattcagtct
tcccaccaattatccatcaccaattccaaaataagtacaggggacgattgtgtttctatt
ggagactacacgtcaaacgttgagattaactttctttcttgtggtcctggccatggcatt
agtattggaagcttggggaaatctggtaatgaggtacaagtggagaacattcatgtcagc
aatgctttcttatatgggacaaccaatggagctcggatcaagacatggcaggctgggaaa
gggtatgtcagaaatgtcatatttgagaatcttatacttcacacagtcaacaaccccata
atcattgatcaacactactgtgacgacccaggcgcctgccaggaaacgggaagtggagtc
caaatcagtgatgttacgtttcggaacatatatggaacatcaggcacagatgtgacggta
aacctgaattgcagcaaagtcgtaccctgcaaagacatacacctgcagtttgttcaatta
gcggcagcacaacctgggaatcttgctactgctagctgtaacaatgcttatgggcaggaa
tttatagttgtacctggtccttgcttgatctaa
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