Ipomoea nil (Japanese morning glory): 109184193
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Entry
109184193 CDS
T04663
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109184193
03009 Ribosome biogenesis [BR:
ini03009
]
109184193
Enzymes [BR:
ini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109184193
Spliceosome [BR:
ini03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109184193
Ribosome biogenesis [BR:
ini03009
]
Eukaryotic type
90S particles
Helicases
109184193
Pre-60S particles
109184193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Motif
Other DBs
NCBI-GeneID:
109184193
NCBI-ProteinID:
XP_019189789
LinkDB
All DBs
Position
Un
AA seq
635 aa
AA seq
DB search
MPEISKVDSTKRKRIRKRDSRKKHSNHENMPDGSPTVAEEEVEKLKENENYGSEHEKGEE
KSLKKDKKKKRKDLAKRMEKDEDENLGEQGSKEEKKKKNLVRKREEDDEGIEEGEEEEEE
EEEEEEEDETRKEIKKAVRSSGSGIMSTELFATLGLSELTMKSINEMGFEYMTQIQARAI
PPMLEGKDVLGAARTGSGKTLAFLIPAVELLFNVKFTHRNGAGVIVICPTRELAIQTHAV
AKELLKYHSQTLGLVIGGATRRGEAERIQKGVNLLIGTPGRLLDHLQNTKGFVYKNLKCL
MIDEADRILEANFEEEMKQIMRLLPKEGRQTALFSATQTKKVEDLARLSFQTTPIYIDVD
DGRKRATNEGLQQGYCVIPSAKRFTLLYSFLKRNLSKKIMVFFSSCNSVKFHSELLGYIQ
IECFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPSVDWIIQYDPPDEPKEY
IHRVGRTARGEGAKGNALLFLIPEELKFLAYLKAAKVPVKQYEFEDRKLANVQSHLEKLV
SNNYYLNKSAREAYRSYILAYNSHSMKDIFNVHRLDLQAVAASFCFSSPPKVNLNIDSSA
SKFRKKHKSERRNGFSESNPYGNKGENDQRQFVRY
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaatctccaaggtcgattccaccaaaaggaagcggataagaaagcgcgattca
aggaagaagcatagcaaccatgaaaacatgcccgatggaagccccacagttgctgaagaa
gaagtggagaaattgaaagagaacgaaaattatggcagtgagcacgaaaagggcgaagag
aagagcttgaagaaagataagaaaaagaagaggaaggatttggcaaaaaggatggaaaaa
gatgaggatgagaacctgggagaacaggggtcgaaggaagagaagaaaaagaagaatttg
gtgagaaagagagaagaagacgatgaaggaatagaggaaggggaagaggaagaggaagaa
gaggaagaggaagaggaagaggatgagacgaggaaggagataaagaaggcagtgaggagt
tcgggctctgggattatgagcacagagttgtttgccacgctggggctttcggaactcacc
atgaaatctattaatgaaatggggtttgagtacatgactcagatccaagccagagcaatt
ccaccaatgttggaaggaaaagatgttctgggtgctgcaaggactggttctggtaaaacc
cttgcctttcttataccagctgtggaattgttgtttaatgtgaaatttacacatcgcaat
ggagctggagtcattgtcatttgccccacaagggagttggccatacagacgcatgctgtg
gcaaaagaacttctcaagtatcattcccagacactgggattggttattggaggtgcaaca
cgaagaggagaagctgaacgtattcaaaaaggagtaaatcttttaataggtactccaggt
cgacttcttgatcaccttcagaacactaagggatttgtttacaaaaacttgaagtgcctc
atgattgatgaagcggataggatattagaagcaaattttgaagaagaaatgaagcaaata
atgagacttcttccaaaagagggtagacaaactgctctattttcagctacacagactaag
aaggttgaggatctggctcgcttgtcttttcagacaactcctatctatatagatgtggat
gatggaagaaagagggccactaatgaaggactgcagcaagggtactgtgtcattccaagt
gctaagcgatttacccttctttattccttcctgaagaggaacttatcaaagaaaataatg
gtcttcttctcttcgtgcaactctgtaaagttccactcggaacttcttgggtatatccaa
attgagtgctttgatattcatggaaagcaaaagcagcagaagcggaccactactttcttt
gatttctgcaaagctgaaaaaggcatattgttatgtactgatgttgctgcaaggggactt
gatattccgtctgtggactggattatacaatatgaccccccagatgaacctaaggaatat
attcatagagttggtcgaacagcacgtggggaaggtgcaaaaggaaatgcattgctcttc
ctgattccagaggaattgaaatttcttgcctatcttaaggctgcgaaagtcccggtaaaa
cagtatgagtttgaggacagaaagcttgccaatgtgcagtcccacctggagaagttggtt
tctaataattattacctgaataaatctgctagagaggcttacagatcctatatattggca
tataattcacactccatgaaggatatattcaatgttcatcggcttgatttgcaggctgtt
gcagcttccttctgtttttcttctcctccaaaagtaaatctaaatatagacagcagcgca
tccaagtttaggaagaagcacaaaagcgaaagaagaaatgggttcagtgaaagcaatcct
tatgggaataaaggtgagaatgaccagcggcaatttgtaagatactag
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