Ipomoea nil (Japanese morning glory): 109184621 Help Entry 109184621         CDS       T04663                                  Name (RefSeq) pre-mRNA-processing factor 39   KO K13217   pre-mRNA-processing factor 39 Organism ini  Ipomoea nil (Japanese morning glory) Brite KEGG Orthology (KO) [BR:ini00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:ini03041]     109184621 Spliceosome [BR:ini03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    Other SAPs     109184621 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_PRP39_N HAT_PRP39_C TPR_14 HAT_Syf1_CNRKL1_N TPR_8 TPR_2 Motif Other DBs NCBI-GeneID:  109184621 NCBI-ProteinID:  XP_019190194 LinkDB All DBs Position Un AA seq 1078 aa AA seqDB search MDSQSSDAANRPQFSEESRKVQGDVVMENALEEAQSVAGEHMAYHMCAYFGVVWCHKCSY VSCLVDSCHERLHQLINGDSLDFGAWNSLITEIEKIHPDDIDMISLAYDSLLSKFPLCHW YWQRYAYHKARLCNADKAVETFEQAVELTPFSVGLWYEYCHFAITYSDDPDDVRRLFRKG LAIVGKDYYCHVLWDKYMVFEFSQQKWVVLAKVYAQALRFPTQKLQKYYKIFKDLVIILE EEIRSLNDGNLEVQAEELYNGASALSDKEISQVVNDLWDPCDISVRCKALHRYKFIGDQL YQKACQLDEKIKSFESNIQRRYFHITPIDDDQLNNWHRYLDFIEKQEDFDWALKLYERCL ISCANYPEFWMRYVDFMEAQGGRELALFAIERAKTVFLNNVPGIHLFSARFKEEIRDLGG ARASFSNYDSGCDIYFIESVVKQANMEKRLGNDEAACEIYEKALRWAMPDKEKQHFLPKL YIHYYRLKHMLTGGADTSRDVLIEGIKQVPDSRLLYEELIRHAMMHDGAKQLSIMDSIIT TAISPLSDGSQGLDIKDREYISTLFLEFVDLCGTVHDVKKAWNLHIKLFPQLIRVNPLYK YPTSKERQSNSSVPFNLSSKNQSSGDLIRQPEQEKLPSLPLVDDKQPSNVSAEQIPTLDD DDVANKKLQQLSPKVSVDFDDESKTDASKQMELVDGLDPRPKEDCPQQMDWTSISERQSK EDASRLPEQEQPSGPNVPPETSEEEARSTNILCPQELELEKQLESVSLEKISPDSQQVPE GQVLVASNHHGSEEIPSTSSGSSEFTHPIQTQNGQGDPELPLVSEKSGQGNIQPRESAAQ EDISVKHGSENQPQMFSSPVSSAQGNTVENTMQTSQQVGHAHQGQAYDQMWQYHSQQQYE LLQQQYQQYQQQFLQMQQSYPHQQPYFNQQTYQQQVPIFQQLQSLPYQQQIQYQQQMQQQ YHNQQYQQMVQSMQPYNQSPALAYQYQMNQQGYEQVLQQYQLNQQISHSLQQQQEQGGYP QVQQHQEQHQHLQEQLDQGQQIVQHGTTSLESQPERVSTQSKTAEEGSRHPKSAQGSL NT seq 3237 nt NT seq  +upstreamnt  +downstreamnt atggattctcagagttccgatgccgcaaacagaccccaattctctgaagaaagtaggaaa gttcaaggtgatgtcgtaatggaaaatgctttagaggaagctcaatcagttgcaggagag catatggcttatcacatgtgtgcgtattttggggttgtctggtgccacaaatgtagctat gtttcttgtcttgtagatagctgccatgaaagacttcatcaactgattaatggagactca ctagactttggtgcttggaactcactgatcacagaaattgagaaaattcatcctgatgac atagatatgatttctttggcttatgactcccttttgtcgaagttcccattatgtcactgg tattggcagcgatatgcttatcacaaggcccggctatgcaatgctgataaggctgttgaa acctttgagcaggcagttgagttaacaccattctctgtcggtttgtggtatgaatattgc cactttgccataacttattctgatgatccagatgatgttcgtagattgtttcgaaaaggc ttggctattgtagggaaggattattattgtcatgtgctatgggacaaatacatggtattt gaattctcccagcagaagtgggtcgttcttgctaaagtttatgctcaggctctacgcttc cctacacagaaactacagaaatattataaaatctttaaggaccttgtaatcattttggag gaggagattcgatctctgaatgatggaaaccttgaagtgcaagcagaagagttgtataat ggagcatctgcactatctgacaaagaaatttctcaggttgtcaatgacctctgggatcct tgtgatatatctgtgaggtgtaaagcattacatagatataaatttattggtgatcagctg tatcagaaagcatgccagctcgatgaaaaaataaaaagctttgaatcaaatatccaaagg cgttattttcatataactcctatagacgatgatcaactaaacaactggcatcggtatctt gactttattgaaaagcaagaggattttgattgggcactgaaactttatgagagatgcttg atatcatgcgctaattaccctgaattctggatgcgctatgtggacttcatggaggctcag gggggacgagagttggcattgtttgctatagagcgggcaaaaacagtatttctaaataat gttccagggatccatcttttctctgccagattcaaggaagaaatacgggatttaggcggt gctcgtgcatccttttctaattatgattcaggctgtgatatctatttcattgaaagtgtt gtaaaacaagcaaacatggaaaagcgcctgggaaatgatgaagcagcttgcgagatttat gagaaagcgcttagatgggcaatgccagataaggagaaacagcattttcttccaaagcta tacatccattattatcggcttaaacacatgctcacaggtggcgcagacacttctagagat gtattaatagaaggaataaaacaggtacctgacagcagacttctttacgaggaactgatt agacatgcaatgatgcatgatggagctaaacaactgagcatcatggactcaattataacc accgcaatctctccattatccgatggatcccaaggtttggatataaaagatagagagtat atatcaactttatttttagagtttgttgatctttgcggaacggtccacgatgtaaagaag gcatggaatcttcacatcaaattgtttccccagctcataagggtcaatccattatataaa taccccacatcaaaagaaagacaaagcaactcctctgtcccgtttaatctgtcgtctaaa aatcagagttccggcgatctaatccggcagcccgagcaggagaagttaccttcgcttcca ctggtagacgataaacagcccagcaatgtatctgcagagcaaatcccgacactggatgat gatgatgttgcaaataaaaagttgcagcaactatctccaaaggtttctgtcgactttgat gatgaatcaaaaactgatgcatcgaaacaaatggaattagttgatggattggatccgcga cctaaagaagattgtcctcaacagatggactggacgtctatctctgaacgtcaatccaaa gaagatgcatcgagactgcctgagcaagaacagccatcgggaccaaatgtgcctccagaa acctctgaggaagaagctaggtcaacgaatattttatgtccgcaggaacttgagctcgaa aagcaactggaatcagtttctttggagaaaatttccccagattctcaacaagtacccgag ggtcaagttcttgtggcctccaatcatcatggtagtgaagaaattccctcaactagcagt ggaagttcagaattcacccatcctatacagacacagaatggtcaaggtgatcccgaactc ccactagtttcagagaagtccggtcaaggaaacatccaacctcgggaaagtgctgctcag gaggatatatcagttaaacatggctcggaaaaccaaccacaaatgttttcctcacccgtt tcttccgcacaaggaaataccgtagaaaacacaatgcaaactagccaacaggttgggcac gcacaccaaggccaagcgtacgatcagatgtggcaatatcattctcagcagcagtacgaa cttctgcagcaacaatatcagcagtatcaacagcagtttctgcaaatgcagcagtcctac ccccatcaacaaccgtattttaatcaacaaacctatcagcagcaagtcccgattttccaa cagcttcagtcgcttccatatcaacaacagatacagtatcaacagcaaatgcagcaacaa tatcataatcagcaatatcaacagatggtccaatcaatgcagccgtataatcaatcaccg gcacttgcttaccagtaccaaatgaatcaacaaggatatgagcaagttttgcagcaatac caactgaatcaacaaatatcgcatagtttgcagcaacaacaagaacagggaggatatccc caggttcagcaacaccaagaacagcaccagcatttgcaggagcaactagatcagggccaa cagattgtacaacatggtaccacatctcttgaatcccaacctgaacgagtttcaacgcaa tcaaagactgccgaagaggggtctagacatcccaaatctgcacagggaagcctctag

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