KEGG   Ipomoea nil (Japanese morning glory): 109184972
Entry
109184972         CDS       T04663                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHA1A
  KO
K16281  RING-H2 zinc finger protein RHA1
Organism
ini  Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:ini00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ini04121]
    109184972
Ubiquitin system [BR:ini04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109184972
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-RING_5 zf-C3HC4 zf-RING_UBOX zf-ANAPC11 zf-RING_16 zf-C3HC4_3 RINGv Prok-RING_4 zf-Nse zf-RING-like zf-RING_4 zf_RING_Vps8_fungal Prok-RING_1 zf-C3H2C3 zf-RING_Vps41 PHD_NSD zf_RING_Vps8 zf-C3HC4_5 SLX1_C zf-C3HC4_4
Other DBs
NCBI-GeneID: 109184972
NCBI-ProteinID: XP_019190516
LinkDB
Position
Un
AA seq 175 aa
MGFPVIYTDVHVPSVIVQILSIMCFLRTVFFSIFASLGLTEAESPELEVYFHESSAGIGN
QSADSMLIRELLEMAKFSEVDGGEDMLESCVVCLGEYESGDEVRWLRNCNHVFHRRCLDR
WIDNGRNTCPLCRASLVPRELQEEFDKRLRAVSVISRDISTEFNSELPHPVSFSS
NT seq 528 nt   +upstreamnt  +downstreamnt
atgggatttccggtgatttacaccgatgtgcatgtgcccagcgtcatcgttcaaattctt
tccataatgtgctttctgagaaccgtctttttctccatcttcgcctctctagggctcacg
gaggcagaatctcctgaactagaggtatattttcatgagagttcagctggaattggaaac
cagtccgcggattcaatgttgattcgggagcttctggagatggcgaagttctcggaggtc
gacggcggagaagatatgctggaaagctgcgtggtgtgtttgggcgagtacgagagcggg
gatgaggtcaggtggttgaggaactgcaatcacgttttccaccggagatgcctggaccgt
tggattgacaacggacggaatacgtgtcctctatgcagggcgtcgcttgtgccacgtgag
ttgcaggaggagttcgataagcggctccgggctgtttccgtcatcagtcgtgatatcagt
actgaatttaactcagaactaccgcatcctgtctccttctcctcataa

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