Ipomoea nil (Japanese morning glory): 109185383
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Entry
109185383 CDS
T04663
Name
(RefSeq) uncharacterized LOC109185383
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ini03016
]
109185383
03036 Chromosome and associated proteins [BR:
ini03036
]
109185383
Enzymes [BR:
ini01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
109185383
Transfer RNA biogenesis [BR:
ini03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
109185383
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109185383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
CHB_HEX_C
Motif
Other DBs
NCBI-GeneID:
109185383
NCBI-ProteinID:
XP_019190926
LinkDB
All DBs
Position
Un
AA seq
1848 aa
AA seq
DB search
MDPMIASLLTSFRLVPPEAIPAMLDCILASTASSPFSIFSTLLEEFPSIAKEKLQAGQNL
ELEQRNFIESYVGALCHILKKPGSDVNSMQLFIWEIFIPLMKLVQSYDRVLLNKVAGLFF
GVVIETNSWEIVGSTIVPFLLRSIGLSMGMLQSKELSVYKWNVHIDNLGGQDPGLQSTQD
ASFKLRNAEMNNNTFLSESNYFQLPTSCYMLTLMLELVLGTLQSVGPTSKLNVADRDCAK
MFAANLVWDLFNLTIEMLLQSLEHRSSAISFLLPSIFQAFDCHSAFEVSINGQKYVLSRN
HILADLWKSCKALFSLGPLERRDAYSTLSLYLSFFSIARGSHGPEDASLNGKETMFDLRA
QKEFWDEIKKGLVNKESFVRKQSLHTLKRTISLSVENQFHSSVDVLDERNSVPHGLTKRE
RWAENEAKSLGVGRICNSIVDSSSSTQKWEAFFLLYEMLEEYGTHLVEAAWNHQMTLLLH
YSPSPESVLNGEPHHMCMDTLEETFDWLVVLWERGFCHDNPQVRCLIMQSFLGIEWRKYK
CCAELISQNFIFGPLMEGLNDPVHHKDFGVKGVYSTWTIEAAAKFLCVYTSYLDQRVAFL
ISLASVAKTQSFGRAGLMCFVKCISSAASGDQKHSISDNDQENGVSAGVTEARFAQESSI
DKADLLDVFRFVIESSRQHFNPTYRHQVCEEILDAAVSVMAPHDVPLETLLLFVASLPRE
LTDSGGSLRLKVQKWLQSFQMHFSSNSSDTNLQLLRTLICFPPKFISCHSMLHSFITYDD
EDLDAWESEAKRWARVLFLVIKGEQDLDPIFMFIQEHGADICKEKTLLEWIPVKYLILIL
SLVYELQLIEDRVVECFTSGRLKMGLDSPGKAVDIPPAKDSRIFEKFTNSFCSLLQDSLV
SFARLSCYIFDSRSIIDDSVLPGSIKGRLGGPSQRRLPSSTASSVLQAITAIKSVASISK
WCIQFRKDASIDFAITYLWNACWKVITSSSSNSEIEAEISLAAYEAVGNALKEMAPMFSL
VSLDLVKQNDGLSPSEADDRLILDSFFSTFLQNINSLIGAGTLVRSRRAVLLHCKWICLE
ALLSIPKFAFQNGVRLGNDNFYFSNDILRQAFNDLVDNLENGSEASVLPMLRSVRLLLEL
FVSGQRGLMVSSCAGISTKMMWRLVHSSWILHVSCNKRRVAPIAALLSSVLQYSMFSDES
MHELDGAPGPLKWFVEKILEEGTKSPRTIRLAALHLTGLWLANPSIIKYYIKELQLLTLY
GSVAFDEDFEAELSENQEAKCEVAVLAKSPDPELTEEFINTELYARVSVAVLFHRLADIA
CMAGLTRESNDGIAALASGKMFLLELINSVLTDKDLSKELYKKYSAIHRRKVRAWQMICI
LSRFVDQDIVQRVTHSLHTCLCKNNLPSVRQYLETFAIHIYLNFPSLVGEELVPIFRDSE
MRPQALSSYVFIAANIILHSTGAAQPERLSELLPPIVPLLTSHHHTLRGFTQLLVYKVLQ
KLMPRHSSCSTTLPLEIRCFEDLKLYLMDNPDCARLRASMEGYLDAFDPQKAVMPAGIFS
TRVEDLEFECVPATLMDRVITFLNDTREDLRSSMAKDAATIKKESLHMDGDVMCNEISEI
LSDKQPASLSNDISFDFQRKVTFSKLEMQGLTSNFSLDDKGSWKSLHDMEKEDQILGQVL
HLRTVAFEKLKKSRQDIILVASLIDRIPNLAGLTRTCEVFRAGGLAIANKDVLKDKQFQL
ISVTAEKWVPILEVPVISMKAFLEKKKQEGFSILGLEQTANSMSLDQYVFPKKTVLVLGR
EKEGIPVNIIHILDACIEIPQLGIVRSLNVHVSGAIALWEYSRQQRCQ
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atggacccaatgattgcttcattattgaccagtttccggctggtccctccggaagctatt
ccggcgatgctggattgtatattggcttccacagcttcatctccattctcaattttttct
actcttcttgaagagtttcccagcattgccaaggaaaaattacaggcagggcagaacttg
gaacttgaacagcgtaattttattgaatcatatgttggtgcattatgtcatattttgaag
aaacctgggtctgatgttaattccatgcagttgtttatttgggaaatttttatcccattg
atgaagttggtacagtcatatgaccgtgtgctattaaataaggttgcaggtttgtttttt
ggtgttgttattgaaacaaacagctgggaaattgttggatcgaccattgtgccctttttg
ttaagatcaattggactatcaatgggtatgcttcaaagtaaagagttgtcggtttataaa
tggaatgttcatattgacaatttaggtggccaggaccctggtctgcaatctacacaagat
gcttccttcaagctaagaaatgctgagatgaataacaacaccttcctatctgaatccaac
tattttcaattgcctacatcctgttacatgttgaccctgatgttggaactggtacttgga
accttacaatcagtaggaccaacttctaaattgaatgtggcagacagggactgtgcgaaa
atgtttgctgcaaatttggtttgggatcttttcaatctgacaattgaaatgcttttgcaa
agtttggaacatcggtcttctgcaattagctttcttctcccttccatattccaagcattt
gattgtcattctgcttttgaagtctcaattaatgggcaaaaatatgtgctttctcggaac
catattcttgcggacctatggaagagttgcaaggctctgttctctttggggcctctggag
agaagggatgcatattcaacactttctttgtatttgtctttcttctctattgctcgtggg
agtcatgggccagaagatgcatctctcaatggcaaggaaacaatgtttgatttgagagct
cagaaggaattctgggatgaaattaaaaagggcttggtcaataaggagagctttgtgagg
aagcaatcactacatacactgaaacgaacaataagtttaagtgtggaaaaccaatttcac
tctagtgttgatgttctggatgaaagaaattcagtccctcatggattgacaaagagagag
cggtgggcggagaatgaagccaagtccctgggggttggtagaatctgcaattctattgtt
gattcttctagcagtacacagaaatgggaggcattctttcttttgtatgaaatgcttgaa
gagtatggtactcacttggttgaagcagcatggaatcaccagatgaccttgctgctccat
tattctccatctccagaaagtgtattgaatggtgaaccccatcatatgtgtatggacact
ttagaggaaacctttgactggttggttgtactgtgggagcgtggcttttgccatgataac
cctcaagtaaggtgcctgattatgcagtcatttctgggtattgagtggagaaaatataaa
tgttgtgcagaattgatctcccagaatttcatttttgggccccttatggaaggattgaac
gaccctgtgcaccacaaagattttggtgtaaaaggagtctattctacatggacaattgaa
gctgctgccaagtttctttgtgtatatactagctatttggatcaaagggttgctttcctt
ataagtttggcatctgttgctaaaactcaatcttttggacgagctggactaatgtgcttt
gtgaagtgtatttcttctgctgcttctggagatcagaaacatagcatttctgataatgat
caagagaatggtgtatcagcaggtgttacagaagccagatttgcccaagaaagctctata
gacaaagcagacttactggatgttttcagatttgtcattgaaagcagtagacaacatttc
aatcccacttaccggcatcaagtttgtgaggaaattcttgatgctgctgtgtctgtgatg
gctccacatgatgtgcctcttgaaaccctactgctttttgttgcaagcttgccacgagaa
cttactgatagtggaggttcattgagattaaaagtgcagaagtggctacagagtttccaa
atgcatttttcttctaactccagcgatacaaatcttcaacttttgcggactctaatttgt
ttcccaccaaagttcataagctgccatagtatgctgcatagcttcattacatatgatgat
gaagacttggatgcttgggaatctgaagcaaaaagatgggcgagggtgctttttcttgta
attaagggggaacaagacttggatcccatattcatgtttattcaagagcatggtgctgat
atctgcaaagagaaaacccttttggagtggattcctgtgaaatatctcatccttattttg
agcttggtatatgaactacaactaattgaagatagagtagttgagtgttttacaagtgga
agattgaaaatgggcctcgactctccgggtaaagcagttgacattcctccggcaaaggat
tctcgtatttttgagaagtttaccaattcattttgttcattactgcaggattcactggtc
tcatttgccagattgtcatgttacatctttgactccagaagcataatagacgacagtgtt
cttcctggttccatcaaaggaaggctgggaggtccaagtcagcgtcggttgccatcttct
actgccagttctgtattgcaagctataacagccataaaatctgtagcatccatctcaaag
tggtgtattcaattcagaaaggatgcttcaattgactttgccataacctacctctggaat
gcctgctggaaggttattacatcctcgtcctctaattcagagattgaagcagaaatctct
ctagcagcatatgaagcagtgggcaatgctttgaaagaaatggcacctatgttctctctt
gtatctctggatcttgtcaaacaaaatgatggtttatctccatcagaagcggatgatagg
ctgatattggattccttttttagtactttccttcagaacatcaatagtttaattggtgct
ggaacgttagtccgatcacggcgagcagttttgttgcattgtaagtggatatgccttgaa
gctttgctgtcaattcctaaatttgctttccagaatggagttcgactgggaaatgataac
ttttacttctccaatgacatattgagacaggctttcaatgatcttgttgacaaccttgag
aatggtagtgaggcctctgttttgcccatgctaagatcagtcagattgctattggagctt
tttgtctcaggacagaggggattaatggtttcttcttgtgctggcataagtactaagatg
atgtggaggttggtgcactcttcttggatcttacatgtgagctgcaacaaaaggagagtt
gctccgattgctgcacttttgtcttctgtattgcagtattctatgtttagtgatgagagc
atgcatgagttggatggtgcacctgggcctttgaaatggtttgtggagaaaattcttgaa
gaaggcactaaaagtccacgcactattcgcttagctgcattacatttaactgggctttgg
cttgcaaatcccagtattataaagtactacataaaagagttacagttgttaacgctttat
ggttctgttgcattcgatgaggattttgaagctgaattgtctgaaaatcaagaggcaaaa
tgtgaagtagctgtgctggctaaaagccctgaccctgaactgactgaagaatttatcaac
acagagttgtatgcacgtgtatccgttgctgttttgttccatagacttgcagatattgcc
tgtatggcaggattgaccagagaaagcaatgatggaattgctgcccttgcatctggcaaa
atgttcttgctggaacttattaattctgtgcttactgacaaggatctatctaaggagttg
tataagaagtacagtgctatccataggcgcaaagtccgtgcatggcagatgatatgcatt
ttgtcacgatttgttgatcaggatattgtccagagagttacccatagccttcatacatgt
ctctgtaaaaacaatttgccttcagttcggcagtatctggaaacttttgcaattcatata
tacttgaacttcccatcactggtaggggaagaattagttccgatcttccgagattctgaa
atgcgaccccaggctttatcttcctatgtgtttatagctgctaatataatcctgcattca
actggagctgcacaacctgagcgcctgagtgaattacttcctcctatagttccattgttg
acctcgcatcatcatacattacgtggttttacccagttattagtctataaagttcttcaa
aagttgatgccaagacattctagttgctctacaaccctgcctttagagataagatgcttt
gaggatctgaaattgtacttgatggacaatcctgattgtgcacggttaagagcatcaatg
gaaggatatcttgatgcttttgatccacagaaggctgttatgccggccggaatattcagc
actcgagttgaggatcttgaatttgaatgtgtaccagcgacgcttatggatcgtgtaatt
actttcctaaatgatactagggaggaccttaggtcttcaatggctaaggatgctgcgact
atcaagaaagaaagtttacatatggatggggatgttatgtgcaatgagatatcagagatt
ctatctgataaacagccagcctctttgtcaaatgatatatcatttgattttcagcggaag
gttactttttccaagcttgagatgcaaggtttgacttctaatttttcgttggatgacaaa
ggatcatggaagtcactgcacgacatggaaaaggaagatcagattcttggtcaagtgcta
catttaagaactgtggcttttgagaaactcaagaaaagtcgacaagatattatacttgta
gcatcacttattgatcgaatacctaatcttgctggcttgacacggacatgtgaggtattt
agagcaggtggactagccattgcaaacaaagatgtactaaaagacaagcagttccaactc
atcagtgtaaccgcagagaagtgggtccccattttagaagtaccagtaattagtatgaaa
gctttcttagaaaagaagaagcaagagggtttctctatcttgggtctggagcagactgcg
aacagcatgtcactcgaccagtatgtctttcccaaaaaaacggtcttggtccttgggcga
gagaaagagggtataccggtgaatattatccatatactggacgcttgtattgagatacca
cagctgggaattgttcggtcactcaatgttcatgttagtggtgccattgcactttgggaa
tatagtcggcagcaaagatgccaatag
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integrated database retrieval system