Ipomoea nil (Japanese morning glory): 109185749
Help
Entry
109185749 CDS
T04663
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
109185749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ini03400
]
109185749
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
109185749
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
TIMELESS_C
Motif
Other DBs
NCBI-GeneID:
109185749
NCBI-ProteinID:
XP_019191250
LinkDB
All DBs
Position
Un
AA seq
670 aa
AA seq
DB search
MEDESDNEKRMVLGLIEKATNSTTPQVDPRLLKGIKSLVRYSDSHLRLAAQTLMSLMKRD
HSQVRYLSLLIIDELFMRSKLFRAILVENLDQLLTLSVGFRRNLPLPAPASVASVLRSKA
IEFLEKWNTSFGIHYRQLRLGYDYLKNTLRFQFPNLQANALRIQQERREREARTKDILLK
KLQTLKDNLASIKYEIQSTTDEICQCLNILNTKDEEDIPLVPLDDEDIEEFRNPELRQLR
HDSLKEGEKVRESTDNKVVFDALRELYRVLITKHIVAVQEWISVLIRVETEDTRFRDSTL
KDFIDIRNHLKSVKAKCEEASACTLSKTTCFEEQVIWEDGNVGSFESRKPVGTQNNDDGR
ALASNPSEVRCEAIEGSDRCPKGNRTFKVKKDTGGESNPLRSELLLNAPVTGWSSFLDNW
GSKRDVLANQRGLDLDGHWGRVDHDAVIPAEKIAELHVHMTVYREDPVEIQPCRAPLRKG
GLCQRRDLRACPFHGLIIPRDDEGKPILQGPLTEETLSETEDKGNAINQCPSMGDMTHAG
DNMVEQLARQAVKNVRERDKGEAKQREHERQNLKRAKLAKVREHNEAVLRDAAIASSSNS
YAGEDQHTTNGTKYSARNKKETLASMLKKKESVRDRLAQKLLNSRAKDATQRQLTVAEEA
NYREAFANQW
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgagagtgataatgagaagaggatggtgttagggcttatagagaaagcaaca
aattcaaccacaccccaagtcgacccgcgccttctcaaaggcatcaaatctctcgtccgc
tactccgactcccacctacgacttgccgcccaaaccctaatgtccctcatgaaacgtgat
cactctcaggttaggtatctctcccttttgattatagatgaactcttcatgaggtcaaag
cttttccgggctatactcgttgagaatttagatcagttattaaccttgagtgtagggttc
agaaggaacctacccctccctgcccctgcttctgttgcatctgttttgcgttccaaggct
attgagttcttggaaaaatggaacacctcatttggaattcactacaggcagcttaggttg
gggtatgattatctcaaaaatacgcttaggtttcaatttcccaatctccaagcaaatgca
ttgcgcatccagcaggagagaagagaaagagaggcgaggacaaaggatattttgctgaag
aagcttcaaactttgaaggacaatcttgcttcaatcaaatatgagattcagtcaacaact
gatgaaatttgccagtgtttaaacattcttaacacaaaggatgaagaggatataccattg
gttccgttagatgatgaagacattgaagagttccgcaaccccgaactgagacaacttcgc
catgactctttgaaagaaggggaaaaggttagggagagtactgacaataaggttgttttt
gatgcactgagggaactgtatagggttctaatcaccaaacatatagttgctgtgcaagaa
tggatatcagttctcataagagtggaaacagaagacaccaggtttagggactctacattg
aaggactttattgatattcgaaatcacctcaaatcagtaaaagcaaaatgtgaagaagcc
tcagcttgcactctttcaaaaactacctgttttgaggaacaagtcatctgggaagatggt
aatgttggatcatttgagagtagaaaacctgttgggacacaaaacaatgatgatggccgt
gctttggcttcaaatcccagtgaggtgagatgtgaagctattgaaggcagtgatagatgt
cccaagggaaatcgaaccttcaaggtcaaaaaggacactggtggtgaatcaaatccatta
cgtagtgagcttttacttaatgctccagtcacgggctggagctctttcttggacaactgg
ggctcaaagcgggatgtcttggctaaccaaaggggtttggatcttgatggacactggggt
agggtagaccatgatgctgttattcctgcagaaaaaattgcagagttgcatgtgcatatg
actgtttatagagaagatcctgttgaaatccaaccatgccgtgcccctttgaggaaaggt
ggactttgtcagaggagagacttgagagcttgtccatttcatggactgataattcctcga
gatgatgaaggaaagccaattcttcaaggcccattgacagaagagacattatcagaaaca
gaagacaaaggaaatgccatcaatcaatgcccttcaatgggtgatatgactcatgcgggc
gataacatggtggagcaattggccaggcaagctgtgaagaatgttcgagagagggataaa
ggtgaagcaaagcagagagaacacgagaggcagaatttgaagcgagcaaagcttgcaaag
gtacgagaacacaatgaagctgttcttcgtgatgctgcaattgcatcttcctcgaattct
tatgctggagaagatcagcatactaccaatgggacaaaatattctgcaagaaacaagaaa
gaaacccttgcatctatgttgaaaaagaaagaaagcgttagagacagattagctcagaag
cttctgaactcgcgggcaaaagatgctacacaaagacagttgacggtagcagaggaagca
aattaccgagaagcttttgcaaaccagtggtag
DBGET
integrated database retrieval system
