Ipomoea nil (Japanese morning glory): 109185807
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Entry
109185807 CDS
T04663
Name
(RefSeq) uncharacterized LOC109185807
KO
K24155
rabconnectin-3a
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109185807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ini04131
]
109185807
Membrane trafficking [BR:
ini04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109185807
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
109185807
RAVE complex
109185807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
109185807
NCBI-ProteinID:
XP_019191299
LinkDB
All DBs
Position
Un
AA seq
2516 aa
AA seq
DB search
MKDGNGTSPSANPINIAGHLPLSLAKSEIVPPAPNRSKSGSEFEPAIDWLPDFAGYSWIA
YGASSLLIITHFPNPLSERETAIGAILRQVFELSADGTGTVSAVAWSPVTPSTGDLAAAL
DNCIGLFSFRPDTSYSSFCWSQTTVLVQSTKVDALKWTGSGDGIVSVGMEVVLWRKKERS
WEIAWKFKPELPQMLVSATWSIEGPLATAPLHRLQVDDLSSPICKTKKCVLVCQGDRDSR
LEHAMLPHPQPVSMIQWRPSALREPSKEDRSFKRSLLLTCCLDGAVRLWSEIDDGRVKKV
FKENDRKVTRLSFRVVAVVEVNQSLSGKLGVDIFVRWATDIDGVIKIREETNYYSSLEEY
QHDKVGKCEWLIAHGPQITLTLWTVHCLDDFAPVRFPRITLWNSKELNYPKVDSKRLPLN
DVFITRNQVFGPPIICSWIELLPCNSLAWLHLYSSRSTVREEGSSKSSTEEQGSSIKCQN
DRFLSCYSRGILNVDNHSDKILQVAVHPYSEVELAASLNANGMLQFWSFSATSDSVMPIL
NPSWKFYGKHYSHSRYSCLRWGPAISNEEWVLFVGHAKGVDFFIVTTSKNEEKKLLCHNV
CTVPFHNEGHEEGPNSVCSISLPSTYNETSVYNNFLLLSVWKCAFQAFSWKISIHQYDSS
SVSCDCSLEKPNNIESSLCKFKGSFCSKTYCVSVEPYSSQFPSPYNHDLASSFQVVCPTN
SVLSELQGSAYEKSSNHFTYHMATGYSDGSLKLWRSMPATILNSQWDLVGMLYTHHGPVL
GISSSSCGRKIATISKADEATTSRNLQIWECVHLMDEGSFILEDTLSFDAEVVALNWLTM
GNGQLLLGVCTSNKLQVYAQRRSGGHYILKPEKSLEGSIWVCVAESHTKAIIRDFFWGSK
ATIVVAHDEYLSLYSRLLFLEDSKTLSKFCGKIYGDAYPCCNDSDKILLGSAIEDFDNFG
QCPSTSPMKMNMIHEIIPVMNVKRSEKECNSFINIGIWSILELTEMLGGSIPVIHPEALL
TNLLSGNWKRPYVGLKCLTEHFSSNTSAKIFCSQNFNCFTLPVPLSNYLEGRVLQSSADK
SFQWNGDIASTEALKGSYQYASNLGHGALYTAPTRSEISGFIEAFDKLSKCSIMSDTEMM
HSRAAINLLQEVSNSQSASAYGSLDESGRRFWVAVRFQQLYFVERFHRVPLVGELDIQSA
LVGWAFHSDCQETLFDSLLSNEPSWQEMHDIGIGFWYTNVSQLRSKMEKLARQQYLKNRD
PRACALLYIALNRIQVLTGLFKISKDEKDRPLVGFLSRNFQEDKNKAAALKNAYVLLGKH
ELELAVAFFLLGGDTTSAVTVCVKNLRDEQLALVICRLVEGYGGPLERYIVTKFLLPSAV
AKGDYWLASFLEWVLGNYSQSYQRMLAIQTEPFLNKYVLSSHQDAFLDPSIGQYCLMLAM
KTSMRNAVGEKNAAVLGRWAILMCATALSRCGLPLEALECLSSSVSIFGNSTQGSIPHNA
DSELFNATILGVLVNKSSSNWISGGVAFDVASHSRLDLAMQYISKLLRKHPCWVDINIMH
LQAHTYSESEYQGCKRLLDIFQHELKETVSCFQQKYSMLPIDLMNMIFLSLSNNSLEHIG
YSLLQDYTSKYTSQEQGRLDTCFLCPLPELLLKVAEEVLHSLSRYIIVCGMSYLYLEPCS
MIDDVVSEHGFGLVQPLKLYEWSFIWSLRYVRDMMVLFSASFQQDFKRNPFTILDLFEFF
LYFSSFWIQRNFRGLTMVLKPLVIVCDKQHASHEINMKDLRETLYQNLEILAHDTPVIDI
ESLHINERQLYKQFGDLLPSVPEGKGPQNLCLSLWGTMSNILEYQLNLIPLESRDCLFES
HNTLQKASSSIIHGGNMPYQIELGAVLARLLKATCGHISAYCAKQLASFLLLRVSRRSAH
LWPQYRNPAKNLDHIIDNAEVLSNEDELSASKMFWSICSEICEVNGNFLQENAELLQHIK
QKSLNGWYDVYPVIMRECESEETCDKEDRLDSPSSAAGSPLACLSPNDHPFLSLSGKYAD
HPKKVLPFNNAKEICRRNGELIEALCINSIDQCQVALASNRKGILFFNWEDGLPYEEKSD
YVWADADWPCNGWAGSEATPIPTCVSPEVRLGKKGTVLGLGGATIDVGLLTRPGKDFTGS
GTFGVPGYAGISSGLGWGIQEDFDECVDPPATVENVRTRALSTHPSRPLFLVGSSNTHVY
LWEFGMDRATATYGVLPATNVPPPYAIASISSVQFDHCGHRFVTAASDGTVSTWQLEVGG
RSNIHPTESSICFNNYTSDVTYVTSSGSIIAAAGYSSSGINVVVWDTLAPPATSQASIMC
HEGGARSLSIFDNDIGSGSISPLIVTGGRSGDVGLHDFRYIATGRTKKHKHCDTSEQNLH
STVDMQKKTGDQNRNGMLWYIPKAHTGSVTKICTIPNTSFFLTGSKDGDVKLWDAKWARL
VFHWPKLHERHTFLQPTSRGFGGVVRAGVTDIQIVSHGFVSCGGDGSVRLVTVKGT
NT seq
7551 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacggaaacggcacgagtccgtcagcaaatccgatcaatatcgccggtcattta
ccgcttagtctggccaaatccgagatcgttcctcctgctccaaaccgatccaaatcaggc
tctgaattcgaaccagcaatcgactggttaccggattttgccggctactcatggattgct
tacggtgcttcgtctcttctcatcatcactcatttccccaaccctctgtcagagagagaa
actgcaattggcgccattttacgccaagtcttcgagctctcagcggacggcactggcact
gtttccgccgtcgcctggtcgccagttacgccttccactggcgaccttgctgccgctttg
gataattgtattgggttgttttcgttccgtccagatacttcttatagttctttttgttgg
agccagactacagtgctggtacaatctacaaaggtggatgcactcaaatggacaggatct
ggagatggcatagtctcagttggcatggaggttgtcttatggagaaaaaaggagaggtcc
tgggaaattgcttggaagtttaaaccagaattgcctcaaatgttagtttcagccacctgg
tcaattgaaggacctttggcaacagcacctctgcatagattgcaagttgatgatttgagt
tctcctatctgcaagactaaaaaatgtgtattagtttgtcaaggagatagagattcacga
cttgaacatgctatgctacctcatcctcagcctgtttctatgatccaatggaggccatct
gcattacgagagccaagtaaagaggacagaagtttcaagaggtcactgttgttaacttgt
tgtctggatggtgctgtaagattgtggagtgagattgatgatggaagggtcaaaaaagtc
ttcaaagaaaatgatcgcaaggttactagattatcttttcgggtggttgctgtggttgag
gtaaatcagtcattgagtggaaaactgggcgttgatatatttgtaagatgggcaacagat
attgatggtgtaattaagattagagaagaaactaactattattcttctcttgaggagtac
cagcatgacaaggttggtaagtgtgaatggttaattgctcatggtcctcaaataacattg
actctttggactgtccactgtcttgatgattttgctccagtgagatttccaaggattact
ttatggaatagtaaagaactcaactatcctaaagtggattcaaaaagattgccacttaat
gatgtttttatcacaaggaatcaggtctttggaccaccaataatttgttcttggattgag
ttattaccttgcaactctctagcctggttacatttatattcttcaagatcaactgttagg
gaagaaggatcttcaaaatcaagtactgaagaacaggggtcttcaattaaatgccagaat
gataggttcttatcatgttattctagaggaattttgaatgttgacaatcacagtgataaa
attttacaagttgcagttcatccatattctgaagttgaacttgcagcctctctcaatgca
aatggaatgcttcaattttggtcattttctgctacttcggatagtgtcatgccaatttta
aatccctcttggaaattttatggaaaacattattcccactcgaggtactcttgcttgagg
tgggggcctgcaatttcaaatgaagaatgggttctttttgtaggacatgctaaaggtgta
gatttctttattgtcacaacttcaaaaaatgaagaaaagaaattattatgtcacaatgta
tgcactgtcccctttcacaatgaaggccatgaagaggggccaaacagtgtctgttcaata
tctttgccttctacttacaatgaaacctctgtttataataatttcttactattatctgtg
tggaagtgtgccttccaggctttttcatggaaaattagcatccaccagtatgattcatcc
agtgtctcttgtgactgcagtcttgagaagccaaataatattgaaagtagtttgtgcaaa
ttcaaaggtagtttttgcagcaaaacatattgtgtctctgttgaaccttattcatcacaa
ttcccttctccatacaaccatgacctagcatctagcttccaagtagtttgtccaactaat
tctgttttgagcgagctgcagggttctgcttatgagaagtccagtaaccatttcacttat
cacatggccactggttacagtgatggtagtttgaaattatggagaagcatgccagctacc
attttgaattcacagtgggatcttgttggtatgctttatacacatcatggtcctgttctt
ggaatatcttcaagttcttgtggtcggaagattgcaacaatctccaaagcagatgaggca
actacttctcgtaatcttcaaatatgggaatgtgtgcaccttatggatgaaggtagcttc
attctagaagacactttgtcttttgatgcagaagtagttgcattaaattggttgacaatg
ggaaatggtcagttgttattgggggtttgtacgagcaataagttgcaggtgtatgctcaa
agacgcagcggaggccattatattttgaagccagaaaaatctttagagggaagcatctgg
gtttgtgttgctgaatctcatactaaagccatcattcgtgacttcttttgggggtccaaa
gccacaatagtggttgctcatgatgagtatttatctctctatagtaggttgttatttttg
gaggatagcaaaaccctgtccaagttttgcggaaaaatctatggggatgcttacccttgc
tgtaatgattcagataaaattttgctaggttcagcaattgaggattttgataattttgga
caatgcccttctacttcccccatgaagatgaacatgatacatgaaattatccctgtcatg
aatgtcaaaagatctgaaaaggagtgtaactcattcataaatattggcatttggagcata
ctagagttaacagaaatgttgggaggatcaatccctgtcattcacccggaggcacttctg
acaaacttactttcaggtaattggaagcgcccttatgtaggtctgaagtgtcttactgaa
cacttcagttctaacacatctgcaaagatattttgctctcaaaatttcaattgtttcaca
ttacctgttccattgtcaaactatcttgaaggacgtgtgttgcaaagttctgctgataag
tcatttcaatggaatggggatattgcatctacagaggccctgaaaggatcatatcaatat
gcctctaatttgggtcatggtgcattatatactgccccaacaagatctgaaatttctggc
tttattgaagcctttgataaactatcgaagtgttcaatcatgtctgacactgaaatgatg
catagtcgtgccgctataaatcttctgcaagaagttagcaattcacagtctgcttctgct
tatggaagtcttgatgaatcaggtcgaaggttttgggttgcagtgaggtttcagcagcta
tattttgttgaaagatttcatagggtgccattggtaggagagctggatattcagtcagca
ttggttggttgggcttttcactctgattgccaggagactttatttgattctctcttatct
aatgaaccttcttggcaagagatgcatgatataggaattgggttttggtatacaaatgtc
tcacaactaagatcaaagatggagaagctggcaagacagcaatatttgaaaaatagagat
cccagggcatgtgcacttctttacattgccttgaatagaattcaagttttaacaggtctt
ttcaaaattagcaaagatgaaaaggacaggccgttggtgggctttctttcccgcaatttt
caggaggataaaaataaggcagcagctctgaaaaatgcatatgttttgttgggcaaacat
gaactggaacttgcagttgcattctttttgcttggaggtgatacgacctctgctgtcact
gtgtgtgtgaagaacctcagggatgaacagcttgcacttgtaatctgtcgtcttgttgaa
gggtatggtggaccattagagcgttatattgtaacaaaattccttcttccatccgcagtt
gcaaaaggtgattactggcttgccagtttcctggagtgggtattaggaaattattcacaa
tcttaccagagaatgcttgccatccagacggagccttttctcaataagtatgtcctctcc
tcacaccaagatgcttttttagatccaagcattggacagtactgcctaatgttagcaatg
aagactagtatgagaaatgctgttggtgagaaaaatgctgcagtcttgggtagatgggca
attttgatgtgtgctactgccttaagtagatgtggtctacctcttgaagcattggagtgc
ctttcttcttcagtcagcatctttggtaattcaactcaaggaagtataccgcacaatgca
gactctgaactttttaatgctactatcttgggagtgttagtaaataagagttcatcaaac
tggatatcaggtggtgtggcttttgatgtagcttcacattcaagactagatttggctatg
cagtacatatccaagttgttgagaaaacatccatgctgggtggacatcaatatcatgcat
cttcaggcacatacatactccgagtctgagtatcaaggctgcaagagattacttgatatt
ttccaacatgaattaaaggaaacagtttcgtgctttcagcagaagtattctatgcttcct
attgatcttatgaacatgatttttttgtccctcagcaacaatagtttggaacacattgga
tatagtctgttacaagattacactagcaagtacacctcacaagaacaaggaagacttgat
acttgctttctctgtcctcttcctgaactacttctgaaggttgccgaagaagtattgcat
tcactttctaggtacatcatagtgtgtggtatgagttatttgtatctagaaccatgttca
atgatagatgatgtggtcagtgaacatggatttggtttggttcaacctttgaagctttac
gagtggagtttcatttggtcattgcggtatgttagagacatgatggtgttgttttctgct
tcctttcagcaggacttcaaaagaaatccttttactattcttgatttatttgagttcttc
ttatacttttcatcattttggattcaaagaaatttcagaggtcttactatggttttgaag
cctcttgtaattgtatgtgacaaacagcatgcttcacatgagatcaatatgaaggatctc
cgggaaaccctttaccagaacttggaaatcttggctcatgataccccagttattgatata
gaatctcttcatatcaatgagaggcaattgtataaacaatttggagatctattgccatca
gttccagaaggaaaggggccgcaaaacctgtgtctctctttgtggggaactatgtctaat
attctggaatatcagctaaatttgataccactggaatctagagactgtttatttgaatcc
cataacacactccaaaaagcatcatcttcaataatccatggaggtaatatgccctaccag
attgagctgggtgcagtactcgctagattactgaaggccacatgtggacacatttctgct
tattgtgcaaaacaacttgcatcattcctgctgctgagggtatcaagaagaagtgctcat
ttgtggccccaatacagaaatccagctaagaatttggatcatattattgataatgcggag
gttctttctaatgaagatgaattatcagcttcaaaaatgttttggagtatctgttctgag
atttgtgaagttaatggaaactttttgcaagagaatgcagagttgttgcagcatattaag
caaaagtccttgaatgggtggtatgacgtgtatccagttattatgagagagtgtgaatct
gaggaaacttgtgataaagaagacaggcttgatagtcctagtagtgctgctggatctcct
cttgcatgcctgtcccctaatgatcatccctttctgagtttaagtggaaaatatgcagat
catccaaaaaaggttttgcctttcaataatgctaaagaaatttgtagaagaaatggagaa
ctcatagaggctttgtgcatcaactccattgaccaatgtcaagtagctctagctagcaat
cggaagggcattctattctttaattgggaggatggactgccttatgaagaaaaatctgat
tatgtctgggcagacgctgactggccgtgtaatggctgggctggatctgaagctacaccg
attcccacatgtgtttctcctgaagttaggctgggtaagaaagggacagtcctggggctt
ggtggagcaacaatagatgtaggtttgttgacaagacctgggaaagattttacaggcagt
ggaacatttggagttccaggctatgctggtattagttctggccttggttggggaattcaa
gaagattttgatgagtgtgttgaccctcctgccacagtggagaatgttagaacaagggca
ttatcaactcacccttcaagaccattgttcttggttggttctagcaatacgcatgtatat
ttatgggagtttggcatggacagagctactgctacgtatggagtgcttcctgctacaaat
gtccctccaccttatgccattgcctctatatcttctgtgcagtttgaccattgtggtcac
cgatttgtaactgctgcatcagatggtactgtgtccacatggcaacttgaagttggagga
aggagtaacattcatccaactgaatcctctatctgctttaacaactatacatcggatgtt
acttatgttacttctagtggttctataatagctgccgcgggatatagctccagtgggatt
aatgtcgttgtatgggatacactagctcctccagctacatctcaagcctccataatgtgc
catgaaggtggtgcacgctctctgtctatatttgataatgatataggaagtggctcaatt
tcgccacttattgtgactggaggaagaagtggtgatgttggactccacgatttccgctac
atagcaacaggaaggacaaagaaacataagcattgtgataccagtgaacagaatctccat
tccacagtagacatgcagaagaaaactggtgatcagaaccggaatggtatgctatggtat
ataccaaaggcccacacagggagtgtcaccaaaatatgtactattccgaacactagtttt
ttcttgacgggaagcaaagatggagatgtaaaactttgggatgcaaagtgggcgagacta
gtatttcattggccaaaattgcatgaaagacacacctttttgcaaccaacctcccgtgga
tttggtggagttgttcgggctggtgttacagatattcaaattgtttctcatggttttgtt
tcttgtggtggagatggttctgtaaggctggttacagtaaaagggacttga
DBGET
integrated database retrieval system
