Ipomoea nil (Japanese morning glory): 109185844
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Entry
109185844 CDS
T04663
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03013
Nucleocytoplasmic transport
ini03015
mRNA surveillance pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109185844
09122 Translation
03013 Nucleocytoplasmic transport
109185844
03015 mRNA surveillance pathway
109185844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109185844
03041 Spliceosome [BR:
ini03041
]
109185844
03009 Ribosome biogenesis [BR:
ini03009
]
109185844
03012 Translation factors [BR:
ini03012
]
109185844
Enzymes [BR:
ini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109185844
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109185844
mRNA cycle factors
Stress granule specific factors
109185844
Spliceosome [BR:
ini03041
]
Complex C
Other components
EJC/TREX
109185844
Ribosome biogenesis [BR:
ini03009
]
Eukaryotic type
90S particles
Helicases
109185844
Translation factors [BR:
ini03012
]
Eukaryotic type
Initiation factors
eIF-4
109185844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
Helicase_RecD
AAA_22
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
109185844
NCBI-ProteinID:
XP_019191337
LinkDB
All DBs
Position
Un
AA seq
409 aa
AA seq
DB search
MAAIASGSVVPANRRRVPMEEERMTFETSEGVEPISTFEQMGVKDDVLRGIYAYGFEKPS
AIQQRAVLPILSGRDVIAQAQSGTGKTSMIALTVCQMVDTKSSEVQALILSPTRELASQT
EKVILAIGDHINVQVHACIGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIK
LLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEMTSKFMTDPVRILVK
RDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTSKMRENNF
TVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYI
HRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatagcttcgggatcggtggttccggcgaatcggaggagggtaccgatggag
gaggagaggatgaccttcgagacctcggagggggtggaacccatatcgaccttcgagcag
atgggcgtcaaggacgacgtcttgcgggggatttacgcgtacgggttcgagaagccgtct
gccatccagcagcgggctgttctgcccatcctgtcggggcgcgacgtcattgcccaggcc
caatctggtactggaaagacctccatgattgccctcaccgtttgtcagatggtcgacacc
aaatcctccgaggttcaagcattgatattgtcgcctaccagggagcttgcatcacaaact
gaaaaggtgatattggccattggtgatcacataaatgttcaggtacatgcttgtattgga
ggcaaaagtgtgggtgaggatatcagaaagctagagcatggtgttcatgtggtttctgga
actcctggaagagtgtgtgatatgattaaaaggagaaccttacgtactagagcaataaaa
ctactaattttggatgaatctgatgaaatgttgagccgtggtttcaaggatcagatttat
gatgtttatagatatcttccgccagagcttcaggttgtattgatttctgccacacttcca
aatgaaattttggaaatgacaagcaaatttatgacagaccctgttcggatcctagtaaaa
cgtgatgagttgaccctagagggcatcaaacagttctttgttgctgtggagaaagaggag
tggaaattcgacacactttgtgatctttatgataccctgaccatcacccaagctgttatt
ttttgcaatacaaagcggaaggtggactggttgactagcaagatgcgtgaaaataacttc
acagtctcatccatgcacggggatatgccacaaaaggagcgagatgctataatgggagag
ttccggtctggcacaactcgtgtcctcattacaacagatgtttgggctagagggctggat
gttcaacaggtttccctggttattaactatgaccttccaaacaatcgagaactctacatt
catcgcattggtcgttctggtcgttttgggcggaagggtgttgcgataaattttgttaaa
agtgatgatatcaaaattctgagggacatagagcaatactatagtacccagattgatgaa
atgccaatgaatgttgcggatttgatatga
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integrated database retrieval system
