Ipomoea nil (Japanese morning glory): 109185868
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Entry
109185868 CDS
T04663
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ini03400
]
109185868
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
109185868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
109185868
NCBI-ProteinID:
XP_019191373
LinkDB
All DBs
Position
Un
AA seq
1149 aa
AA seq
DB search
MSSHSQLKPLSPQEWESLIDDYNHGGARLFRWTAAHYSGTLLFELALSSVVRKDLPLNLK
LQLLIFLEEHSSTVIPSAAASASASFSRLIDTLRSVVQSPNDGVSITFPLKEQFLISTTS
IFVTTNANGDSGSNTISSGLVPHFEGLIELLLTIINRPNHSVDRQTRSVTCDCLRELEIA
FPCLLSDVASQLWALSQSERTHAGQSYALLLATVVANIVKLKPNASFTNASMPLVPFNVP
SCVIDDADNNATGEDKHSTEKQISDLSNKDLKRVVAFLLEWPHNLTPWGLLEFMDKILPV
AAALDLQASLLKVQFSGLLSTYDPLLWHAYLAMCLRFLDSFEGQELEIARRLLLLSKESQ
HHLVFRLLALHWLLGFVGLVLNRDEGKRGNVLEMSLSFYPAVFDPLALKSLKIDLLAYCS
ILVIKGNGVVSTETSPKVSVEKLFEDALVSVSAFKWLPPWSTETAVAFRAFHKFLIGASS
HSEADSVSNRILTESTIFHTVQKTLVASMSEYKGMVPVTVTFIDRLLACHKHHLLGEHLL
KTFDEHLLPKLKLDYRLGSYFPILEKMAMSSKVSPSGLLELLVKFMLFLIEKHGPDTGLR
SWCHGSKVLGICRTMLMHHHSSKLFLGLSRLLAFTCLYFPDLEVRDNARIYLRMLICIPG
KKLRDILNSGDQLPGVSPSTHSSPFFTVQSPRFSHDLKKSRNISSYIHIERVIPLLVKQS
WSLSLATLGIHNKKPGYLEAIRDTEPMSEHREIDRNNDQSVSETYRTDLLPGVPEPLLVM
DSKICQIVEMLRRHFSSIPDFRHMPGLRIKIPCSLWFESEPFNRIWGSDMAANEFDGVDA
LPAIYAAVLRFSSSAPYGSIPSYHIPFLLGQPPRSFNSFNEHNSLEIVPVDNSSYSPGEV
EGFNTHVMIELEPREPVPSLVDIFIEANTVSGQIIQGQLRSISVGIEDMFLKAIPPDDIS
GEAVPDYYVQLFNALWEACGTSTSTGRETFVLKGGKGVAAISGTRSVKLLEIPAASLIQS
VERCLAPFVVCVTGELLINIVKGGGVIRDIVWGDTSPDSSIDDVSTQETSVVGGPLYLKY
LDDEDDRGGNAQFTKKNMGCFQILIFLPPRFHLLFQMEVCDTSSLVRIRTDHWPCLAYID
DYLEALFCL
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcacagtcagctgaaaccgttaagccctcaagaatgggaatctctaatcgac
gactataaccacggcggcgcgcgtctgtttcgctggaccgccgcccattactccggcacg
ctcctctttgagctcgctctctcctccgtcgtccgcaaagacctccctctcaacctcaag
ctccagctcctcatcttcctcgaggagcactcctccactgttattccatccgccgcagcc
tccgcctccgcctccttcagtcgactcatcgacaccctccgctccgttgttcaatcccca
aatgacggcgtttcgatcactttccctctcaaggaacagttcctcatctccaccacctcc
atcttcgttacgacgaacgccaatggtgatagcggatcaaatactatcagttcgggtctc
gtgccgcatttcgaaggcctaatcgagcttctgttgacgataatcaaccgaccgaatcac
agcgtggaccggcaaacccggtccgtgacctgcgattgcttacgcgagctcgaaatcgct
ttcccttgcttactctcggacgttgcatcgcaactatgggctttatcacaaagcgagaga
actcatgccggtcagagctatgcgctgttactagccaccgtagttgcgaacattgttaag
ttaaaacccaatgcttcatttactaatgcttctatgcctttggttcctttcaatgttccg
tcttgtgtgattgatgatgctgataataatgctaccggggaggataagcattctactgag
aagcagatatccgatttgagtaacaaggacctaaagagagtggttgcatttttgcttgag
tggccacataacttgactccatgggggttattggagttcatggataagatattgcctgtt
gctgcagccttggatttgcaggcttcattgttgaaggtgcagttctcgggactactttct
acatatgatcctttgctttggcatgcttatttagcgatgtgtttgaggtttctggactca
tttgaagggcaggagttggaaattgcccgtagactgttgttgttgtcgaaagaatcacaa
catcatttggttttcagattgctggcactccactggttgttggggttcgttggactagtg
ctgaatagagatgaggggaaaaggggaaatgttcttgaaatgagtttgagcttttatcca
gctgtttttgatccacttgctttgaagtccttaaaaattgacttgcttgcatactgctct
attttggttattaaaggaaatggagtagtgagcactgagactagcccaaaagtgtcagtg
gagaagctatttgaagatgcccttgtttctgtatctgctttcaaatggttgcctccttgg
agcacagaaacggcagtggcatttcgtgccttccacaaattcctgattggtgcatcgtct
cactcagaagctgattctgtttccaacagaattctcactgaatccaccatcttccacact
gtacagaagacacttgtagcctctatgtctgaatataaaggaatggtccctgttactgtc
accttcattgaccggttgctggcatgccataaacaccatttgttgggtgaacacctcctt
aagacctttgatgagcatttacttcctaaactaaagctagactataggttgggatcttac
ttcccaatattggaaaaaatggctatgagtagtaaagtttcaccaagtggattgttagag
ctccttgtgaagttcatgttgtttcttatcgagaaacatggtccagatacagggttgaga
tcttggtgtcatgggagtaaagttcttggcatttgtcgaacaatgcttatgcatcaccat
agctctaagttattccttgggctatctcgtcttctagcattcacttgcctttattttcca
gatttggaagttcgtgacaatgcaagaatctacttgcggatgctcatttgtattccaggg
aagaaacttagagacatactgaacagtggggaccagttgcctggagtgtccccatctacc
cactctagtccattttttactgttcagtctcctagattttcccacgacctcaagaaatca
aggaatatatcatcgtatattcacattgagcgtgtgattccattgttggttaaacaatct
tggtccttgtcacttgcaaccctggggattcacaacaagaaacctggttatttagaagcc
atcagggacactgaaccaatgagtgaacacagggagatagatagaaataatgatcaatca
gtctctgaaacctatagaactgatctgctgccaggagtgccagagcccttacttgtgatg
gattccaagatttgtcagatcgttgaaatgttgaggaggcatttttcatccattcctgac
tttagacacatgccagggctcaggattaaaataccctgttccttatggtttgaatcagaa
ccattcaatcgcatatggggttccgatatggcagccaatgaatttgatggagttgatgca
cttcctgccatatatgcagcagttttaagattttcttcttctgccccgtatgggtcaatc
ccatcatatcatatacccttccttcttggtcagccccccagaagtttcaattctttcaac
gaacataattcattagagatagttccagtggataacagttcttattctccaggagaagtg
gaaggcttcaacactcatgttatgattgaattggaaccacgggaaccggtgcctagtctt
gttgacattttcatcgaagcaaatacagtcagtggtcaaatcatacaagggcagcttcgt
agtatcagtgtaggaatagaggacatgtttctcaaagccattcctccagatgacatcagt
ggagaagcagtacctgattattacgttcaattattcaatgctttgtgggaagcatgtggg
acatccaccagtactgggcgagagaccttcgtgttgaaaggaggcaaaggtgttgctgca
ataagcggaacccggtcagtgaaacttctggaaattccagcagcatctctgatccaatct
gttgaacgatgtttagcaccctttgttgtctgtgtaaccggtgagcttcttattaacatc
gtgaaaggcgggggagttatcagggacattgtctggggggatacctctccagactcctcc
attgatgatgtctcgacacaagaaacaagtgtcgttggagggcctctttatctcaaatac
ctggacgatgaagacgatagaggaggtaatgctcaatttactaagaagaacatgggatgc
tttcagattctgatattcctgccaccaagattccatctcctcttccaaatggaagtttgt
gatacctcttctcttgtccggattagaactgatcactggccatgcttggcttacattgat
gactatttggaagctttattttgtctatag
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