Ipomoea nil (Japanese morning glory): 109186319
Help
Entry
109186319 CDS
T04663
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109186319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109186319
Spliceosome [BR:
ini03041
]
Common components
Common spliceosomal components
SR proteins
109186319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
109186319
NCBI-ProteinID:
XP_019191795
LinkDB
All DBs
Position
Un
AA seq
418 aa
AA seq
DB search
MKFVWGYIGNYSVGITPFLPASTHTHRWVTHLPIDIFHSPPLFFLNSLQLGFRLFTSLAN
FPAGEMRPVFCGNFEYDTRQSDLERLFRKYGKVDRVDMKSGFAFVYMEDERDGDDAIRGL
DRLEFGRKGRRLRVEWSKEERGRRHESSRKSSGGGSTRLSKTLFVINFDPYHTRTRDLER
HFEPYGKILNIRIRRNFAFIQYEMQEDATKALDATNLSKLMDRVITVEYAIKDDDERKSG
YSPDRTRDRSPRRGYDRGRSRSPCGRERASPDYGRGRGRSPSPYRRERPSPVYGRSPSGS
PNHKGRDSEHARGRSPNVRKERNSGNGSAHSLSPRQESPAPGNGRANGELEGGSPDYARE
HSRSPHRERQEKSSPDGYRHGGSPNLKHEVMDGPEYGGESPPERYRSGSASSRERSRS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtgtggggttacattggtaattatagcgtaggaattactccattcttgcca
gcttccacacatactcacaggtgggttacccacttacccatagatatttttcattctccg
cccctcttctttctcaactcgctgcaattagggttccgactttttacgagcttggcaaac
ttcccagcaggtgagatgaggccagttttctgtggaaactttgagtacgacactaggcag
agtgacctggagaggctcttcagaaaatatggaaaggttgacagggtggacatgaagtct
ggttttgcttttgtgtacatggaagatgaaagagatggcgatgatgccatacggggactt
gatcgactggaatttggtaggaaggggcgtaggcttcgtgttgagtggtcaaaggaagaa
cgaggcagacgccatgagagttccaggaaatcttctggtggtggtagtacaaggctttca
aagactttgtttgtcatcaactttgatccctaccatactaggacaagggacttagagagg
cactttgagccatatggtaaaatactcaacataaggatcagaaggaattttgcattcatt
caatatgaaatgcaagaggatgccaccaaagcattggatgccacaaacttgagtaaattg
atggatcgtgtcattacggtggaatatgctatcaaagatgatgatgagcggaaaagtgga
tatagtcctgatagaactcgtgacaggtctcctaggcggggttatgatcgtggtcggtct
cgaagcccttgtgggagagagagggccagtcctgactatggtcgtggtcgaggccgtagc
cccagtccatatcgtcgagaaaggcccagtcctgtttatggtcgtagccctagtggaagt
ccaaatcacaagggaagggattctgaacatgcccgtgggcgtagtccaaatgttaggaag
gagaggaattctggtaatggtagtgcccacagcctgagtcctcgacaggagagtcctgct
cctggcaatggccgtgctaacggtgagctcgaggggggaagtcctgattatgctcgtgaa
cacagccgcagtcctcacagagaaaggcaagagaagtccagtcctgatggctatcgtcat
ggtggcagcccaaatttaaagcatgaagttatggatggccctgaatatgggggagaaagt
ccacctgaaagatacaggagtggttcagcctcatcgcgagagaggtctcgttcctga
DBGET
integrated database retrieval system
