KEGG   Ipomoea nil (Japanese morning glory): 109186417
Entry
109186417         CDS       T04663                                 
Name
(RefSeq) DNA mismatch repair protein MSH7
  KO
K08737  DNA mismatch repair protein MSH6
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    109186417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ini03400]
    109186417
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     109186417
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II AAA_29
Other DBs
NCBI-GeneID: 109186417
NCBI-ProteinID: XP_019191929
LinkDB
Position
Un
AA seq 1106 aa
MKRQSSILSFLKKPSPEDQRSGGAALNGHQPTHLQHNKNAPPLTKSAVLPSTLDLTEEPK
GTDTPPEKVPRQIFPTNDDGSGTKPSVFDSIKHKFVKFHNGDKFSDRNLASGGTLMMSSV
TSGSERSEVHSDASLGSKLLAKENAVGFNRTIKQGDNGCSSVIVSNDDALGPETPGTRPL
VPRLKRVQEDAQGLQDKGDCSALNMNKRVKTLQDSITVRKNLEEVSEMTSKFEWIHPSRI
KDANGRRPGDPSFDKNTLYIPPDALRKMSASQKQYWGVKCRYMDVVLFFKVGKFYELYEL
DADIGHKELDWKITMSGVGKCRQVGISESGIDDAVQKLLARGYKVGRIEQLETSEQAKSR
GSTSVIQRKLVNVLTPATSSEGNIGPDAVHLLSIKEGCLDMEKGSTAFGFAFVDCAALKF
WVGSISDDASCAALGSLLMQISAKEVIYDSRGLSKEAQKALKKYSLTGTAAPQLTPIQQD
ADFVDSSKVKNFIQLKGYFKGSLNGWDHVFDGVMHQDLAFCAFGALASHLTRLMLDDVLR
NGDILTYEVYRGFLRMDGQTLVNLEIFGNNADGGPSGTLYKYLDNCITSSGKRLLRSWIC
HPLKDVDTVNLRLNVVEELMTHSETMSFVAQYFRKLPDLERLLGRVKASNQSSAELLLPT
IGRKLLKQRVKVFGSLVKGLRIGMDLLMLLHKEEQLSSSLSKVFRLPVLHGNDGLHKFLT
QFEAAIDSDFPNYQDHDITESDAETLSILMELFIEKATEWSQVIYAIGCVDVLRSFAVTA
TFSTGAMCRPIILPLSESTNLSHENKGPVLEMKGLWHPYALSESEGLPVPNDLQLGGETD
YYNRCTLLLTGPNMGGKSTLLRATCLAVVMAQMGCYVPCEACTLSLVDIIFTRLGSTDRI
MTGESTFFIECRETASVLQNATQNSLVLLDELGRGTSTFDGYAIAYAVFRHLVEIVNCRQ
LFATHYHALTKEFGSHPHVILKHMACSFKSKSLNDQELVFLYRLASGACPESYGMQVALM
AGIPKQVVESASKAGKVMKTKIGESFRSSEQRSSFSTLHEEWLKSLVLISKSGVSELDED
AFDTLFCMWHELRSSDGFLNSAASHQ
NT seq 3321 nt   +upstreamnt  +downstreamnt
atgaaacgtcagtcatctatactctcgtttttgaaaaaaccctcgccggaggaccaacgt
tccggcggagccgcattaaatggccatcaacctactcatcttcagcacaataaaaatgct
cctccgcttactaaatctgccgtgcttccgtccaccttggatttgactgaagaacctaaa
ggcaccgatactcctcctgaaaaggtaccgcgtcagattttcccgaccaacgacgatggc
agcggaactaagccttcagttttcgatagcattaagcacaagttcgtgaagtttcataac
ggagacaaattttcggataggaacctggcaagtggtggtactttaatgatgtcctctgtt
actagtggaagtgaaagatcagaggtacatagcgatgcttctttgggttctaaactctta
gcaaaggaaaatgctgtgggtttcaatagaactatcaaacaaggagacaatggatgctcc
tctgttattgtgagcaatgatgatgctcttggaccagaaacaccaggcacacgccctttg
gttcctcggttaaagcgagttcaagaggatgctcaaggtcttcaggataagggcgactgt
tctgccttgaatatgaacaagagagttaaaaccctgcaggattctattactgttaggaag
aaccttgaagaggtgtctgaaatgactagtaagtttgaatggatacatccttctcgaatc
aaggatgcgaatggtagaagaccaggtgatccttcttttgacaagaacacactgtatatt
cctcctgatgctttgagaaaaatgtcagcatctcagaaacagtattggggtgtcaaatgc
cgatatatggatgtggtgcttttctttaaagtggggaagttttatgagctttatgaacta
gatgctgatattggccacaaggagcttgactggaagataaccatgagtggcgtgggaaaa
tgtagacaggttggcatatcagaaagtgggattgatgatgctgttcagaagttgctagct
cgagggtataaagtggggcggatagaacaactagagacttcagagcaagctaaatccagg
ggttctacttctgttattcaaaggaaacttgttaatgtacttacacctgccacttcaagt
gagggtaatattgggcctgatgcggttcatcttctttccataaaggaggggtgcttggat
atggagaagggttccactgcatttgggtttgcttttgttgattgtgctgctttaaaattt
tgggttggttcaatcagtgatgatgcatcctgtgcagctttggggtctttgttgatgcag
atatctgctaaggaagttatatatgactcacgaggactgtcaaaagaagctcagaaagct
ttgaagaaatactcgttaacaggaactgctgccccgcaattgacccccattcagcaagat
gcagattttgttgattcttcaaaagtgaaaaatttcattcagttgaagggatactttaaa
ggatcacttaatgggtgggatcatgtctttgatggagtaatgcaccaagatcttgcattt
tgtgcttttggtgcacttgccagtcatttaacgcggctaatgttagatgatgttttacgc
aatggcgacatccttacatatgaagtctatcgaggtttccttagaatggatggacagaca
ctagtcaatcttgaaattttcggcaataatgctgatggtggtccatcagggactctgtac
aagtatcttgacaattgcataacatcatccggtaagaggcttctaaggagctggatctgt
catccattaaaagacgtcgatactgttaacctcagacttaatgtggttgaggaacttatg
actcattcagaaacaatgtcatttgttgctcaatactttcgtaagcttcctgatttggaa
aggctgcttggacgtgttaaagctagtaatcagtcttctgcagaacttctgctgcccaca
attgggagaaaattattgaaacagcgagttaaagtgtttggatcacttgttaaagggctg
aggattggcatggatttgttgatgttattgcataaggaagagcagctgagctcttcatta
tccaaagtcttcagactgccagttttacatggtaatgatgggttgcataaattccttacc
caatttgaagcggcaattgacagtgacttcccaaattaccaggatcatgatataactgag
tccgatgccgaaaccctatcaattctgatggagttatttattgagaaggctactgaatgg
tcgcaagtgatttatgccattggttgtgttgatgtgttaaggtcttttgccgttactgca
acattttctactggagctatgtgtaggccaataatcttacctctttcagagtcaacaaat
ctttcacacgagaataagggaccagtgctggaaatgaaaggattgtggcacccctatgcc
ctcagtgaaagtgaggggctgccagttcctaatgatctccagctcggtggggagacagat
tactacaatcgttgtactttactgttaactggaccaaatatgggtggaaagtctacactt
ttacgtgccacatgtctggctgttgtgatggcccagatgggctgctatgtgccttgcgag
gcatgtactctctcacttgtggacatcatcttcactcgtcttggttccactgaccgaatc
atgactggtgaaagcacattctttatagagtgtagggagactgcatcagtgttgcaaaat
gccactcagaattctcttgttctccttgatgaattgggcagagggacaagcacatttgat
ggatatgctatcgcatatgcagtattccgtcatcttgtggaaattgtgaactgccgccaa
ttgtttgctacacactatcatgcactgacgaaggagtttggatcccatcctcatgtcatc
ttgaagcacatggcctgctcattcaaatcgaagtctctcaacgatcaggagcttgttttc
ctataccggctggcctctggagcctgtccggagagctacggaatgcaagtagcactcatg
gccgggatcccaaaacaagtggttgaatctgcatccaaggctggtaaagtaatgaagaca
aagattggagaaagttttagatcaagcgaacagagatcaagcttctcaacactccatgaa
gagtggttgaagtctctggtactcatctccaagtcgggagtgagcgagcttgatgaggac
gcatttgatacgttgttttgcatgtggcacgagctaagaagctcagatggattcctcaac
tcagccgcatcgcatcagtag

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