Ipomoea nil (Japanese morning glory): 109186417
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Entry
109186417 CDS
T04663
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109186417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ini03400
]
109186417
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109186417
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
109186417
NCBI-ProteinID:
XP_019191929
LinkDB
All DBs
Position
Un
AA seq
1106 aa
AA seq
DB search
MKRQSSILSFLKKPSPEDQRSGGAALNGHQPTHLQHNKNAPPLTKSAVLPSTLDLTEEPK
GTDTPPEKVPRQIFPTNDDGSGTKPSVFDSIKHKFVKFHNGDKFSDRNLASGGTLMMSSV
TSGSERSEVHSDASLGSKLLAKENAVGFNRTIKQGDNGCSSVIVSNDDALGPETPGTRPL
VPRLKRVQEDAQGLQDKGDCSALNMNKRVKTLQDSITVRKNLEEVSEMTSKFEWIHPSRI
KDANGRRPGDPSFDKNTLYIPPDALRKMSASQKQYWGVKCRYMDVVLFFKVGKFYELYEL
DADIGHKELDWKITMSGVGKCRQVGISESGIDDAVQKLLARGYKVGRIEQLETSEQAKSR
GSTSVIQRKLVNVLTPATSSEGNIGPDAVHLLSIKEGCLDMEKGSTAFGFAFVDCAALKF
WVGSISDDASCAALGSLLMQISAKEVIYDSRGLSKEAQKALKKYSLTGTAAPQLTPIQQD
ADFVDSSKVKNFIQLKGYFKGSLNGWDHVFDGVMHQDLAFCAFGALASHLTRLMLDDVLR
NGDILTYEVYRGFLRMDGQTLVNLEIFGNNADGGPSGTLYKYLDNCITSSGKRLLRSWIC
HPLKDVDTVNLRLNVVEELMTHSETMSFVAQYFRKLPDLERLLGRVKASNQSSAELLLPT
IGRKLLKQRVKVFGSLVKGLRIGMDLLMLLHKEEQLSSSLSKVFRLPVLHGNDGLHKFLT
QFEAAIDSDFPNYQDHDITESDAETLSILMELFIEKATEWSQVIYAIGCVDVLRSFAVTA
TFSTGAMCRPIILPLSESTNLSHENKGPVLEMKGLWHPYALSESEGLPVPNDLQLGGETD
YYNRCTLLLTGPNMGGKSTLLRATCLAVVMAQMGCYVPCEACTLSLVDIIFTRLGSTDRI
MTGESTFFIECRETASVLQNATQNSLVLLDELGRGTSTFDGYAIAYAVFRHLVEIVNCRQ
LFATHYHALTKEFGSHPHVILKHMACSFKSKSLNDQELVFLYRLASGACPESYGMQVALM
AGIPKQVVESASKAGKVMKTKIGESFRSSEQRSSFSTLHEEWLKSLVLISKSGVSELDED
AFDTLFCMWHELRSSDGFLNSAASHQ
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcagtcatctatactctcgtttttgaaaaaaccctcgccggaggaccaacgt
tccggcggagccgcattaaatggccatcaacctactcatcttcagcacaataaaaatgct
cctccgcttactaaatctgccgtgcttccgtccaccttggatttgactgaagaacctaaa
ggcaccgatactcctcctgaaaaggtaccgcgtcagattttcccgaccaacgacgatggc
agcggaactaagccttcagttttcgatagcattaagcacaagttcgtgaagtttcataac
ggagacaaattttcggataggaacctggcaagtggtggtactttaatgatgtcctctgtt
actagtggaagtgaaagatcagaggtacatagcgatgcttctttgggttctaaactctta
gcaaaggaaaatgctgtgggtttcaatagaactatcaaacaaggagacaatggatgctcc
tctgttattgtgagcaatgatgatgctcttggaccagaaacaccaggcacacgccctttg
gttcctcggttaaagcgagttcaagaggatgctcaaggtcttcaggataagggcgactgt
tctgccttgaatatgaacaagagagttaaaaccctgcaggattctattactgttaggaag
aaccttgaagaggtgtctgaaatgactagtaagtttgaatggatacatccttctcgaatc
aaggatgcgaatggtagaagaccaggtgatccttcttttgacaagaacacactgtatatt
cctcctgatgctttgagaaaaatgtcagcatctcagaaacagtattggggtgtcaaatgc
cgatatatggatgtggtgcttttctttaaagtggggaagttttatgagctttatgaacta
gatgctgatattggccacaaggagcttgactggaagataaccatgagtggcgtgggaaaa
tgtagacaggttggcatatcagaaagtgggattgatgatgctgttcagaagttgctagct
cgagggtataaagtggggcggatagaacaactagagacttcagagcaagctaaatccagg
ggttctacttctgttattcaaaggaaacttgttaatgtacttacacctgccacttcaagt
gagggtaatattgggcctgatgcggttcatcttctttccataaaggaggggtgcttggat
atggagaagggttccactgcatttgggtttgcttttgttgattgtgctgctttaaaattt
tgggttggttcaatcagtgatgatgcatcctgtgcagctttggggtctttgttgatgcag
atatctgctaaggaagttatatatgactcacgaggactgtcaaaagaagctcagaaagct
ttgaagaaatactcgttaacaggaactgctgccccgcaattgacccccattcagcaagat
gcagattttgttgattcttcaaaagtgaaaaatttcattcagttgaagggatactttaaa
ggatcacttaatgggtgggatcatgtctttgatggagtaatgcaccaagatcttgcattt
tgtgcttttggtgcacttgccagtcatttaacgcggctaatgttagatgatgttttacgc
aatggcgacatccttacatatgaagtctatcgaggtttccttagaatggatggacagaca
ctagtcaatcttgaaattttcggcaataatgctgatggtggtccatcagggactctgtac
aagtatcttgacaattgcataacatcatccggtaagaggcttctaaggagctggatctgt
catccattaaaagacgtcgatactgttaacctcagacttaatgtggttgaggaacttatg
actcattcagaaacaatgtcatttgttgctcaatactttcgtaagcttcctgatttggaa
aggctgcttggacgtgttaaagctagtaatcagtcttctgcagaacttctgctgcccaca
attgggagaaaattattgaaacagcgagttaaagtgtttggatcacttgttaaagggctg
aggattggcatggatttgttgatgttattgcataaggaagagcagctgagctcttcatta
tccaaagtcttcagactgccagttttacatggtaatgatgggttgcataaattccttacc
caatttgaagcggcaattgacagtgacttcccaaattaccaggatcatgatataactgag
tccgatgccgaaaccctatcaattctgatggagttatttattgagaaggctactgaatgg
tcgcaagtgatttatgccattggttgtgttgatgtgttaaggtcttttgccgttactgca
acattttctactggagctatgtgtaggccaataatcttacctctttcagagtcaacaaat
ctttcacacgagaataagggaccagtgctggaaatgaaaggattgtggcacccctatgcc
ctcagtgaaagtgaggggctgccagttcctaatgatctccagctcggtggggagacagat
tactacaatcgttgtactttactgttaactggaccaaatatgggtggaaagtctacactt
ttacgtgccacatgtctggctgttgtgatggcccagatgggctgctatgtgccttgcgag
gcatgtactctctcacttgtggacatcatcttcactcgtcttggttccactgaccgaatc
atgactggtgaaagcacattctttatagagtgtagggagactgcatcagtgttgcaaaat
gccactcagaattctcttgttctccttgatgaattgggcagagggacaagcacatttgat
ggatatgctatcgcatatgcagtattccgtcatcttgtggaaattgtgaactgccgccaa
ttgtttgctacacactatcatgcactgacgaaggagtttggatcccatcctcatgtcatc
ttgaagcacatggcctgctcattcaaatcgaagtctctcaacgatcaggagcttgttttc
ctataccggctggcctctggagcctgtccggagagctacggaatgcaagtagcactcatg
gccgggatcccaaaacaagtggttgaatctgcatccaaggctggtaaagtaatgaagaca
aagattggagaaagttttagatcaagcgaacagagatcaagcttctcaacactccatgaa
gagtggttgaagtctctggtactcatctccaagtcgggagtgagcgagcttgatgaggac
gcatttgatacgttgttttgcatgtggcacgagctaagaagctcagatggattcctcaac
tcagccgcatcgcatcagtag
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