Ipomoea nil (Japanese morning glory): 109186436
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Entry
109186436 CDS
T04663
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109186436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109186436
Spliceosome [BR:
ini03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109186436
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
109186436
NCBI-ProteinID:
XP_019191961
LinkDB
All DBs
Position
Un
AA seq
883 aa
AA seq
DB search
MEKEKSSRKDRESTKEREHKHRSSKDKSRDAASDEDDNRHHHRHRSKHRGGDEGDDRRRS
DNRHRRHSEEDSFDRERSTERHRSEREGSLDRREKSHDRDKRERSHEREIKRDESVERRH
LSKRKERGDSEDRNDGAEKRVRVSEGKNENGKEKEDRRERRRFDDGEVKDKEERRERKRF
EDKVKQEDMRVDEERMEREFQNRTSKKEEPVDDAQHVDSVANGLAMESSNKAPRTLPETS
LAPVDPPATKVSSISTNENRGVNINRSHAVPGKSSTDGTASGAGKRGGFSLDALAKAKRA
LQMQKELAEKLKKIPTLNKGAGSTREGSQQVGATESLKASSTNAGVQPALVASSNSGILP
TPASAAPSTLDLPAGASVNLPPSGLPHLAGLTAQKYEAVKRAQELAAKMGFRQDPEFAPL
INMFPGQMPQEVTIQPKPAKAPVLRLDALGREIDEQGNVVNMPKPSSTLKVNINKKKKDA
FQILKPELEVDPDENPHFDARMGLNKNKILRPKRMSFQFVEEGKWSKDAEIIKLKSQFGE
ARAKELKAKQAQLAKAKAEPDINPNLIEVSQRVFTQEKQKEPIPEVEWWDVPVLQSGAYG
DITEGNISHDKLRMEMITIYVQHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLARE
KDKQEMIRQGLLEPPKPKVKMSNLMKVLGSEATQDPTKLEMEIRSAAAEREQAHIDRNIA
RKLTPDERREKKERKLFDDANSTLETIVSVYKINDLSHPQTRFKVDVNAQENRMTGCAVI
SDGICVVAVEGGKKSIKRYGKLMLRRIDWAAAVKTEEDEDEDEDEEKPINKCVLVWQGSV
AKPSFHKFFVHECRTEAAARKIFADAGVPHYWDLAVNFKDEEL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagaaatccagtcgcaaagacagagaatcaacaaaggaaagggagcacaag
caccgaagctccaaggacaagtctagagatgctgccagcgacgaagacgataatcgccat
caccaccgccatcgctcaaagcaccgtggcggagacgaaggcgacgaccgccgcaggtcg
gacaatcgccaccgtcggcattccgaggaggattccttcgatcgggagagatcgactgag
cggcacaggagtgagagagagggaagcttagacaggcgcgagaaatctcacgatcgggac
aagcgcgagagatcgcacgagcgcgaaattaagagagatgagtctgtggagaggcggcat
ttgagtaagaggaaagagagaggagacagtgaggatagaaatgatggagctgagaagaga
gttagggtttccgagggaaagaatgagaatggaaaggagaaggaagatagaagggagagg
aggagatttgatgacggtgaggtgaaggataaagaagagaggagagaaaggaagaggttt
gaggataaagtgaaacaggaggatatgagggttgatgaggaaaggatggaaagggaattt
caaaatagaacttctaagaaagaggagccagttgatgatgctcaacatgtcgattctgtt
gcaaatggtctagcaatggaatcatccaacaaggcaccaaggactttgcctgaaacctct
ttggctcctgttgatcctcctgctaccaaggtatcttcgatttctacaaatgaaaatagg
ggagttaatattaacagatctcatgcggttcctgggaaatccagtacagatgggacagct
tccggtgctggcaagagagggggcttttctcttgatgctttagctaaagccaagagagct
ttacaaatgcaaaaggagctagcagaaaagcttaagaagattcctacattaaataagggt
gctggttcaactagagagggtagtcaacaagtgggagctacagagagccttaaagcctcg
tcaactaatgctggagtacagccagctctagttgcatcttccaattctggtatactaccc
acaccagcaagtgctgccccgagcacgttagacctgcctgcaggagcttctgtcaatcta
ccacctagtggcttacctcatcttgctgggctaacagcacagaaatatgaagcggttaaa
cgtgcacaagagcttgctgcaaagatgggatttcgacaagacccagagtttgctcccctt
ataaacatgtttcctgggcagatgccacaagaagttaccattcagccaaagcctgccaaa
gctcctgttctccgtttggatgctttgggcagggaaatagatgaacaaggaaatgttgtt
aatatgcctaaaccatctagtactcttaaggtaaacatcaataaaaagaaaaaggatgct
ttccaaatattgaaaccagagcttgaagttgatcctgacgaaaatccccattttgatgct
aggatgggtcttaacaaaaataagattctaagacccaagaggatgagttttcagtttgta
gaggaaggcaaatggtccaaggatgcagaaataattaagttgaagagtcaatttggagaa
gcacgtgccaaggagctaaaagcaaagcaagcacaattagcaaaggcaaaagcagagcct
gatataaatccaaatctcattgaggtctcacagagagttttcacccaggaaaagcaaaag
gaaccaattcctgaggttgagtggtgggatgttcctgttctgcaatctggtgcttatggt
gacatcactgaaggcaatataagtcatgataagttgaggatggaaatgatcaccatttat
gttcagcacccacgccctattgagcctcctgcagaaccagctccacctccaccacaacca
ctgaagctaaccaaaaaggagcagaagaagcttcgtactcagcgtaggttggctagagag
aaggataaacaagagatgattagacaaggactattggaaccaccaaaaccaaaagttaaa
atgagtaacctcatgaaagttcttggatcagaagccacccaagatcccacaaagcttgaa
atggagattagaagtgctgctgctgagcgtgagcaagctcatatagacaggaacatagct
cgtaagcttacccctgatgagcggcgtgaaaagaaagagaggaaactttttgatgacgcc
aatagcacgctggagactatagtttctgtatacaaaatcaacgatctttcgcacccacag
acccgtttcaaggtggatgtcaatgctcaggagaaccgtatgacagggtgtgcagtgatt
tcagacggtatttgtgttgtggcagttgaaggcggcaagaaatctattaaacgttatggg
aaacttatgctcaggcggattgattgggctgccgctgtcaaaacggaagaagatgaagac
gaagacgaggatgaagaaaagcccatcaacaagtgtgtgttggtttggcaagggagtgtc
gctaaaccaagcttccacaaattctttgttcacgaatgcaggactgaagctgcagcccgg
aaaatttttgctgatgcaggtgttccccactactgggatctcgctgtcaacttcaaagac
gaagaactttaa
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