Ipomoea nil (Japanese morning glory): 109186635
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Entry
109186635 CDS
T04663
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03082
ATP-dependent chromatin remodeling
ini03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109186635
03083 Polycomb repressive complex
109186635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ini03036
]
109186635
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109186635
Histone modification proteins
HAT complexes
HATB complex
109186635
HDAC complexes
Sin3A-HDAC complex
109186635
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
109186635
PRC2.2
109186635
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
109186635
Heterochromatin formation proteins
Other heterochromatin formation proteins
109186635
Chromatin remodeling factors
NuRD complex
109186635
NuRF complex
109186635
NuRF complex (fruit fly)
109186635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
Beta-prop_HPS5
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
eIF2A
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
109186635
NCBI-ProteinID:
XP_019192252
LinkDB
All DBs
Position
Un
AA seq
491 aa
AA seq
DB search
METPQQQPRRRGRPKGSSAKSKEDRDREQPHSAAGATPRMRGPGADKKAAAAAADEKYAQ
WKSLVPVLYDWFANHNLVWPSLSCRWGPVVEQHSHKNRQRLYLSEQTDQSVPNTLIVANC
DVVRPRIAADSHISHFNEESRSPYVKKYKTIIHPGEVNRIRELPQNKNIVATHTDSPEVL
IWDVEAQPNRHAVLGAVASRPDLTLIGHSENAEFALAMCPTEPFVLSGGKDKSVVLWSIQ
DHISTLSTDAQKPAGSSIKAGDNPSIQARGIFQGHEDTVEDVQFCPSSSQEFCSVGDDSC
LILWDARVGTSPVVKVEKAHNADLHCVDWNPHDGNFIITGSADNSVRLFDRRSLTSNGVG
SPVHIFENHKAAVLCVQWCPDRSSVFGSTAEDGRLNIWDYDKVGEKDNETPAPGLFFQHA
GHRDKIVDFHWNVADPWTIVSVSDDCDSTGGGGTLQIWRMLDLLYRPEEEALAELQKFKD
HVSKCAPKSDS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcctcagcagcagccgaggaggcgcggccgtcccaagggctcttctgccaag
tccaaggaggacagagatcgcgagcagccgcactccgctgccggcgccacccccaggatg
agaggacctggagctgacaagaaggccgccgctgccgcagctgacgagaagtacgcgcag
tggaagtcgctcgttcccgtcctctatgactggtttgctaatcataacctcgtatggccg
tcactgtcctgccgatggggtcctgtggttgagcagcacagtcacaaaaaccgccaacga
ctttatctttcagaacagacagatcaatcagtgccaaacactttgattgtagccaactgt
gatgtggttcgacccaggattgcagcagacagtcacatatcacacttcaatgaagaatca
cgctcaccttatgtcaagaagtacaaaaccattatacacccaggggaggttaacagaatc
agagagcttcctcaaaataaaaacatagtggcaacccatactgatagtcctgaagttcta
atttgggatgtggaagcccaacctaatcgacatgctgttcttggagctgttgcttcacgc
ccagatttgacattgattggacatagtgagaatgcagaatttgcattggcaatgtgcccc
actgaaccctttgtgctctctggaggaaaggacaaatctgtggtactgtggagtattcaa
gatcatatatcaacattgagcacagatgcacaaaaacctgctggttcatctattaaggct
ggtgataatccctctattcaagctcgtggaatcttccaaggccatgaggataccgttgaa
gatgttcagttctgcccatcaagttcacaggaattctgtagtgttggtgatgattcatgt
ctcattctatgggatgctcgagttggtactagtccagttgtaaaggttgaaaaagctcat
aatgctgatctccactgtgttgactggaatcctcatgatggcaactttattatcactgga
tctgcagataattctgtccgcttgtttgatcgacgtagtttaacttcgaatggagttggc
tcaccagtccatatctttgaaaatcacaaagcagcagttctttgtgtgcagtggtgtcca
gacaggtcctctgtatttgggagtactgcagaggatggtcgtttgaatatttgggattac
gataaggttggtgagaaggacaatgagacacctgctccaggtttatttttccagcatgct
gggcacagggataaaattgttgacttccactggaatgtggctgatccatggacaattgta
agtgtatctgatgactgtgactccacaggtggaggtggtacactacagatatggcggatg
ttggatttgctgtatcgtcctgaagaggaggctctggccgagcttcaaaaattcaaagac
catgtaagcaagtgcgctccaaaatctgattcctaa
DBGET
integrated database retrieval system
