Ipomoea nil (Japanese morning glory): 109186646
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Entry
109186646 CDS
T04663
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109186646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109186646
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
109186646
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
109186646
NCBI-ProteinID:
XP_019192267
LinkDB
All DBs
Position
Un
AA seq
210 aa
AA seq
DB search
MDDRPSSPAEGTDGAHRNALDIYPLNCYFFGSKDAVTFKDETLADRVGRMKLNYDTYGLR
TCVQAVLLVELFKHPHLLLLQVRNSIYKLPGGRVRPGESDIDCLKRKLTSKLSMEGHGSW
EVVECIGMWWKPDFETLVYPYLPPNIERPKECTKLYLVRLPASCKFIVPKNFNLLAIPLC
QIHENRKTYGPIISGVPQLLSKFSINVVEP
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcggccttcttcaccggcggagggaaccgacggagctcaccgtaacgcactg
gatatttaccctttgaactgttacttctttggatccaaagacgctgttaccttcaaggat
gaaacgttagctgatcgcgttggccgaatgaaattaaactacgatacgtatggattgagg
acctgtgtgcaggcagttctattggttgaactgttcaaacatccccatcttttgttgtta
caagtgaggaactctatatataagcttccaggtggtcgagttaggcctggtgaatcagat
attgactgcctcaagcgcaagcttacaagcaaactatctatggaaggacacggcagctgg
gaggtagtagaatgcattggaatgtggtggaagcctgattttgaaacattggtttatcca
tatttgccaccaaacatagaaagacccaaggaatgcacaaaactttatcttgtgaggttg
cctgcaagctgcaagttcattgtacccaaaaacttcaacctactcgcgattccattatgt
caaatccatgaaaaccgcaagacctatggaccaataatatctggagttccacagcttctg
tcaaagttctccatcaatgtagttgaaccgtaa
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integrated database retrieval system
