Ipomoea nil (Japanese morning glory): 109186652
Help
Entry
109186652 CDS
T04663
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109186652
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ini01009
]
109186652
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109186652
03036 Chromosome and associated proteins [BR:
ini03036
]
109186652
Protein phosphatases and associated proteins [BR:
ini01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
109186652
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
109186652
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
109186652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
wHTH-Calcineurin_assc
DUF4187
Motif
Other DBs
NCBI-GeneID:
109186652
NCBI-ProteinID:
XP_019192278
LinkDB
All DBs
Position
Un
AA seq
539 aa
AA seq
DB search
MDVDFNGDVASLDTELLQLPDFSPLAIKTKAYVVEKLFDEWLSTPDTIVLVKTLVSNAKG
ACPLGVSGTSSSSSAATSNSLPSIFPAGNAPPLSPRSSSGSPRTLKQRAGPSNLGSSLKL
VIEPVKELIPQFYFQNGSPPPNELKERCLFRTNQIFYGHIDGIPMHEFKLITKEICKMPS
FFSTSLFRKIDVNGTGNLTRDAFVDYWINGGMLTKDIATQIFSILKQPDLKYLTQADFKP
VLRELLATHPGLEFLHGTPEFQERYAETVTYRMFYYINRSGTGRLNLRELKRSDLISALQ
HADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIF
SQVPRKFTSKVEGKMGYEDFVYFILAEEDKPSEPSLEYWFKCIDLDGNGILTRNEMQFFY
EEQLHRMECMAQEPVLFEDILCQMIDMINPENASFITLHDLKGSKLSGSVFNILFNLNKF
MAFETRDPFLIRQERENPNMTEWDRFAHREYIRLSMEEDAEDASNGSPDMWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggatttcaacggtgatgtggccagcctagacacggagctattgcagcttccg
gacttttctccgttggccatcaaaacgaaggcgtatgtcgttgagaagctctttgatgaa
tggctctcgactcctgatacgattgttttggtaaaaactttggtcagtaatgccaagggt
gcttgtcccttaggtgtctcaggaacttcttcaagcagtagtgctgccacaagcaattct
ttgccttctatctttcctgctggcaatgcacctccactttcaccacgaagttcttcgggt
tcacctagaaccctgaagcagagggcagggccttctaatttaggttcctctctgaaatta
gtgattgaaccggttaaagagctgataccacagttctactttcaaaatggcagtccacct
ccaaatgaattgaaagaacggtgtttgtttcgaaccaatcagattttctatggtcatata
gatggaataccaatgcatgaattcaaactaataactaaggaaatatgcaagatgccatca
ttcttctctacttctctttttaggaagattgacgttaatggcaccgggaatttgaccagg
gatgcctttgttgattactggatcaatggcggtatgttgactaaagatatagcaacccaa
atattctcaatcttgaagcagccagatctcaagtatctaacacaggcggacttcaaacca
gtgcttagagaacttttggctactcatccagggttggaattcttacacggtacacctgaa
tttcaagaaagatatgctgaaactgttacatacagaatgttttactacataaacagatcg
ggtaccggccgtcttaacctcagggagctgaaacgttcagacctaatttctgcattgcaa
catgcagatgaagaagaagatatcaacaaggtcttgaggtacttctcctatgaacacttc
tatgtcatatattgcaagttttgggagctggatacagatcacgattttctcattgataaa
gagaaccttattagatatggtaaccatgcacttacttatcggattgttgatagaatattt
tctcaggttccaagaaaattcacaagtaaggttgaaggaaagatgggttatgaagatttt
gtttacttcatattggcagaggaggataagccatctgagcctagtcttgagtactggttc
aagtgtatagatttggatggaaatgggattctgacaaggaatgaaatgcaatttttttat
gaggagcagctgcatcgaatggaatgcatggcccaagagcctgtactttttgaggatatt
ttgtgccaaatgattgacatgattaatccagagaatgccagctttattacgttacatgac
ttgaagggcagcaaactttcaggcagtgttttcaacattctttttaacctcaacaaattc
atggcatttgaaactcgtgatcctttcctgattcgtcaggagcgagagaacccaaatatg
accgagtgggatcggtttgcacacagagaatatattaggctttcaatggaggaagatgct
gaagatgcctccaatggaagtcctgatatgtgggatgaatcacttgaagctcccttttaa
DBGET
integrated database retrieval system
