Ipomoea nil (Japanese morning glory): 109186870
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Entry
109186870 CDS
T04663
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Module
ini_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109186870
Enzymes [BR:
ini01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109186870
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
109186870
NCBI-ProteinID:
XP_019192590
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All DBs
Position
Un
AA seq
402 aa
AA seq
DB search
MEVFVFLFILGLISSSRVSCKSFNVIDYGAKGDGMTDDSQAFLNAWKDACSSTPVHKSPQ
VIIPAGSTFLVKPVQFNGPCKSQHIHFIVSGTVVAPGSPPGWNGLDTSQWLSFNGVYGLI
VNGGGVIDGQGKKWWDQSCRDHPNMEGCTDLAPTAMKFMFCINTTLSNIHFVSSPQAHVQ
LFVCNGFNINNLTVQSPGDSPNTDGVHIHASKHVVITHSKISCGDDCISIGDFTNDVEIN
NVQCGPGHGISVGSLGKSGNFVQVENIHISNSTFYGTTNGARIKTWQTGRGYARNITFEN
LQVFSVDNPIIIDQNYCSYPGTCKEQGTGVQISDVVFQRINGTATTEAAISLNCSKAVPC
LGIKLDSIDITPQIPSVPVAACCSNAHGEETSVEPGPCLKQD
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttttgtttttttgttcattcttggcttgatatcatcatcaagagtttcttgc
aaaagctttaatgtgatagactatggagccaaaggggatggaatgacagatgattcccaa
gcttttctgaatgcatggaaggatgcatgttcttcgactcctgtgcataagtctcctcaa
gtgatcattcctgcaggctcgacgtttctggttaaaccagttcaatttaatggcccctgc
aagtctcaacatatccatttcatagtgtcgggtacggttgttgcaccgggctcaccaccg
ggttggaatgggctcgacacaagtcagtggctaagtttcaatggtgtatatgggctgatt
gttaatggtggaggggtaattgatggacaagggaagaaatggtgggatcaatcatgtaga
gatcatcccaatatggaaggatgcacagacttggctccaactgcaatgaagttcatgttc
tgcattaacacgactctcagcaacatccattttgtcagtagccctcaagcgcatgtgcaa
ctttttgtatgcaatggcttcaacattaacaatttaactgttcaatctcctggagatagt
ccaaatactgatggggttcacatccacgcttctaagcatgtggtcatcacccattctaaa
ataagctgtggagatgattgcatttccattggagacttcactaatgatgttgaaataaat
aatgtccaatgtggtccaggccatggtataagtgttggaagcttaggaaagagtggcaat
tttgttcaagtggaaaacattcatatcagcaactctaccttttatgggacaacaaatgga
gctcggatcaagacatggcagactggcagaggatatgcacggaacataacgtttgaaaat
ctacaagtcttttcggtagataaccccatcatcatagaccaaaactattgctcctatcca
gggacatgcaaggaacagggaactggggttcaaatcagtgatgtcgtttttcaaagaata
aatgggacagcaactacagaggcagccataagccttaactgcagtaaggcagtgccgtgc
ttaggaataaaactggattccatagacataacgccacagataccctcggtgccagttgca
gcttgttgtagcaatgcacatggcgaggaaactagcgtggagcccgggccttgtctaaaa
caagactga
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