Ipomoea nil (Japanese morning glory): 109187123
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Entry
109187123 CDS
T04663
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109187123
Enzymes [BR:
ini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109187123
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109187123
NCBI-ProteinID:
XP_019192821
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All DBs
Position
Un
AA seq
325 aa
AA seq
DB search
MAALPYADVDFNLRSLAGRAEGFGRFSIGGLNGGLYRVTTLADDGPGSLRDGCRKKEPLW
IIFEVSGVIHLSSYLSVSSYKTIDGRGQRVKLTGKGLRLKECEHIIVCNLEFEGGRGHDV
DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFANHDKTMLIGADPSHVN
DRCIRVTIHHCFFDGTRQRQPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
GQKKKAFEYYTEKAADKEEARSGIIRSEGDLFLNGAQGFLLNGVGEQCFHPSEFYPNWTL
ETVSDSLKSVLQICTGWQSLPRPAE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcagcattaccttacgctgacgtcgactttaacctcagatctctggccggtcgagcc
gaaggattcggaaggttctccatcggcggcctcaacggtggcctttatcgtgttaccact
ttggccgatgatggtccaggatcacttcgtgatggatgccgtaagaaagagccactgtgg
attatctttgaagtttcaggtgtcattcatctctcatcctacctgagtgtgtcatcttat
aagacaattgacgggcgtggacaaagggtaaagctgactggcaaaggattacgtctaaag
gaatgtgaacatataattgtatgcaacttggagtttgaaggtggcaggggtcatgatgtt
gatggcattcaaataaaacccaattctaggcacatatggattgatcgctgttcactccga
gattatgatgatggcctaatagacataacaagacaaagcacagacataactgtttctaga
tgctattttgcaaatcatgacaaaacaatgcttattggagcagacccctctcatgtcaat
gatcggtgtataagagtgaccattcaccattgtttttttgatggtacacgccaaaggcag
cctcgtgttagatttggtaaagttcacctgtacaacaattacacaagaaattggggtata
tatgctgtgtgtgccagtgtagaatcacagatttactctcaatgcaacatttatgaagca
ggacaaaagaaaaaagcttttgaatactacacagagaaggcagcagataaggaggaggca
agatcaggcataattagatcagagggtgatttgtttctgaatggagctcaaggattctta
ttaaatggagttggtgagcaatgtttccatccaagtgaattttaccctaactggacattg
gaaacggtttcagactccctcaaatctgtactgcaaatttgcacaggctggcaatctctt
cctcggccagcagaataa
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