Ipomoea nil (Japanese morning glory): 109187232
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Entry
109187232 CDS
T04663
Name
(RefSeq) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ini03009
]
109187232
Enzymes [BR:
ini01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
109187232
Ribosome biogenesis [BR:
ini03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
109187232
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
FtsJ
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_31
Methyltransf_25
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
109187232
NCBI-ProteinID:
XP_019192926
LinkDB
All DBs
Position
Un
AA seq
544 aa
AA seq
DB search
MEASSCRASSVFSTRFYEHKKRISPPIPLSARVTASASLLTASSPRNQAISKTTPQHPAR
KSGPPRDSSRIQKEVSPHRAVSAVRLMRIEFGGAFADLLNEQGKGSGKSEMGYVERTLGF
CTRELDDRDLRLVTEIVGGTIRWRRYLDYLILSLCHDENTFRGMEPLLLQILRIGFYEIV
KLEMPPYAVVDENVKLAKFALRPGAGNMVNGILRKLVFLKENDSLPEVKIEGNDRQQARA
LSTLYSHPVWMVRRWTKYFGLEEAIKLMVWNNNDPSFSLRANTGKGLTRDDLVTRLTMLK
VQHEPSPYLDDFVRIKTGMQNVIQGGLLKEGFCSVQDESAGLVVSIVDPKPGESIIDCCA
APGGKTLFMASRLRGQGMVFAVDINKGRLRILKETARLHETIDVITTVHADLRKFSGSNA
VKSDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEQLKNLQDELLDSASTLVRPGGALIYS
TCSIDPEENEERVEAFLLRHPEFYIDPVDKYVPSEFVTRKGFYASNPVKHAVDGAFAARL
ILSR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggaggcatcaagttgccgcgcctcttctgtcttttcgactcgtttctacgagcataag
aagagaatttcgccacccattccactttcggcacgagttactgcctctgcgtcgctcctc
acggcttcttctccaagaaaccaagcaatttccaagacaactccgcaacaccctgctcgc
aaatcagggcctccgagagattcgagcagaattcagaaggaagtttctcctcatagagct
gtctctgctgtgagattgatgcgtatagaatttggtggtgcttttgctgaccttttgaat
gagcaagggaagggttcagggaaaagtgaaatgggatatgttgaaaggactcttgggttt
tgcactcgcgagttagatgatagagatttaagactggtaacagagattgttggaggtacc
attcgctggaggagataccttgattatttgattctttcactgtgccatgatgagaataca
ttcagaggcatggagcctcttttgctacagattcttcgaattggtttctatgagatcgtc
aaattagaaatgccaccttatgcagtggtagatgagaatgttaagcttgcaaaatttgct
ctcagacctggtgctggtaacatggtaaatgggattctaaggaagctagtctttcttaag
gaaaatgattcccttcctgaagtgaaaattgaaggtaacgatcgccagcaagcgcgtgct
ctcagcactctttactctcacccagtttggatggtgagacgatggacaaaatattttgga
cttgaagaagctattaagctgatggtatggaacaacaacgatccaagtttcagcctcagg
gcaaatactggaaaaggtttaacaagggatgaccttgtgacacgccttacaatgttgaag
gttcaacatgagccttctccctacttggacgattttgttcgtatcaaaacaggaatgcag
aatgtcattcaaggtggtttactaaaagaaggcttttgttcggtccaggatgagagtgca
gggttggtggtttctattgttgatccaaaacctggtgagagcattattgattgttgtgct
gctccgggaggaaaaacccttttcatggcatcccgcttgagaggccaaggcatggtgttt
gcagtcgacataaataaaggccgattaaggatcctcaaagagacagcaagattgcatgaa
actatcgatgtcatcacaactgttcatgctgatcttcgtaaattttctggcagtaatgct
gtcaaatctgacaaagttttgctagatgctccttgttcaggattgggagttctttctaag
cgagcagatttacgttggaatagacgactcgaggatatggaacaacttaagaatttacaa
gatgaacttcttgattcagcttcgacgttggtgaggccaggtggagcgctaatatacagc
acttgctccattgatccggaagagaatgaagaaagagttgaagcttttcttctgaggcat
ccagagttctacattgatccagtagacaaatacgttccctcagaatttgtgaccagaaag
ggtttctatgcctcgaatcctgtcaagcatgcagttgatggagcctttgctgctcgtctc
attttatctcgataa
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