Ipomoea nil (Japanese morning glory): 109187809
Help
Entry
109187809 CDS
T04663
Name
(RefSeq) putative leucine-rich repeat-containing protein DDB_G0290503
KO
K20283
golgin subfamily A member 4
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ini04131
]
109187809
Membrane trafficking [BR:
ini04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
109187809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CALCOCO1
Crescentin
Tropomyosin
TPR_MLP1_2
ATG16
GAS
ERM_helical
Motif
Other DBs
NCBI-GeneID:
109187809
NCBI-ProteinID:
XP_019193693
LinkDB
All DBs
Position
Un
AA seq
1465 aa
AA seq
DB search
MEVETQASHEIPVAKAAEETDTNGVHTKATNGELNPVDKVVKEEEKTVLDGEIIKVEKET
SLQSVVEKSREFLEAQEKVKELELELEKITEHLKNSESQNTMLKEELLHTKEKLGESGIK
YEELELNHKKLQEQIADAEGRYSSQLNALQDALQAKDAKHAELDSVKEAFDGLSLELESS
RKKMEELEQELQISASEAQKFEELHKQSGSLAESETNKAMEFERLLEVATKSTKEMEEQV
ASLQGELKVLCEKIAESEKVEEALKSTTAELSNVQGELGASKSELQALEAKLAAEEAVRN
ELTQELEMRKASESQIMENMSALEKICSSAKEDLQARTLEIDEIKLKLQEEVAAKEEVEA
KEKSQEAELAMMQEKLSKLSEEKEAAEAALSDLANKAANMKELCNDLEAKLQSSDENFSK
SNSLLSQALENNVELEQKFKALEELHQESQHATTTAHQKILELEEMLQASNAAAEDVKTQ
LRELETRFIAAEQRNVELEHQLNQVELKRSDAERELEEFSVKISELNASLEKVVEEKSIL
NAQIQEHQDKIAHMESDSIKLATRNSELEEELKGVQAKCEEHEGRANVNDQRSRELSDLM
QISHTKAEESDKKASELELLLATEKHRIQELEEQISALENKCGDAEAESKKLSEKVSELE
EELTAYQNKASSFEIALNSATEKEKELSECLTVAAEEKKNLEDAYKNSTERLAESENLLE
VLRNELNDTQQKLESIENDLKAAGMKESEVMEKLKSAEEQLEEQGKVLEQATSRSVELES
LHAALARDSELTLQDATAKLASRDSEVESLNEKLNTLEDQVKSYKEQIAEATERSTAVKD
ELEQVLLKLSLSESTNEDFKNKILEAESKSAEVLSENELLTETTNQLNRRIADLEEQLNS
VSAEKEATIQQLASHTSTITELTEKHSRAFEAHAVTEARVSETEVKLEEALQKFCEKDLE
AKDLAEKLHSLQDLVKRYEDQVHETSALVENQKVELELSISNLRDQERIIEELKSASGKL
EEERKGLLIENSEISEKVASYELKLNDLETKSSAVIAEKNEAVEELKKVIEDLTEQLSSA
GQNLEEERKGLSEKVASYELKLNDLETKSSAVIAERNETVEGLKKLIEDLTEQLSSAGKN
LEEERKDLQEKVASYELKLNDLETKSSAVIAEKNEAVEGLKKVIEDLTEQLSSAGQNLEE
ERKCLSEKVASYELKLNDLETKSSTVIAEKNTTVEGLKKVIEDLTEQLSSEGQNLQTQLS
SALEEKKQLHEKHQHSEKELLSQIAHLEAQLQEHKSSKDVLQSKVEVLTADISQKSELQN
LVKELEEQLASVKLQVKEQKEAESQKEMKLEATFKELQAKSNAVTLLESKAKELEQKLQL
AEAQLKEKEEKLPLEMKSRDIGSTVSAVSNRKKKSGASSGQAVSSDSPTVHVHGTDAASP
MKTLKHILGVALISVITGIILGKRY
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagaaactcaagcaagtcacgagataccagtcgcgaaggctgccgaggaaaca
gacaccaatggcgttcatactaaggcgaccaatggggagttgaatccggtagacaaagtg
gttaaagaagaagagaagacagtgcttgatggggaaatcataaaagtagagaaggaaact
tctctgcaatctgtagtggagaaaagcagggaatttctggaagcacaagaaaaggtgaaa
gagctggagctggaactggaaaaaatcactgaacatttgaagaactctgaatctcagaac
acaatgttgaaggaagaactcttgcatacaaaggagaagttgggggaaagcgggataaag
tatgaagagctagagctcaatcacaaaaagttacaagagcagattgcagatgccgaaggg
agatacagttcccagcttaatgcattgcaagatgcattgcaagcaaaagatgcgaagcac
gctgagctagacagtgttaaggaggcatttgacggacttagcctcgagctcgagagctct
aggaagaagatggaagagcttgagcaagagctgcagatttctgctagcgaggcgcagaag
tttgaggagctgcacaagcaaagcggttcgcttgcagagtcagaaacaaacaaggccatg
gagtttgagaggctgctagaggtcgccacgaaaagcacgaaagaaatggaagaacaggtg
gcttctctgcaaggggagctaaaagtgctctgtgaaaagattgcagaaagtgagaaggtt
gaggaggcactgaagagtaccactgcagagctctcgaatgttcaaggcgagttaggcgct
tccaaatcagaactacaggcattggaggcgaagcttgctgcagaagaagctgttcgaaat
gaattgactcaagaattggagatgagaaaagcttcagagtctcagataatggaaaacatg
tcagctcttgagaagatatgttcatcagccaaagaagatctgcaggctaggacattggag
atcgacgaaatcaagttgaagctgcaggaggaagttgccgcaaaggaagaagtcgaagct
aaagagaaaagccaagaagcagagcttgcaatgatgcaggagaaactttccaaactctct
gaagaaaaagaagcagctgaagcagctctctctgatttagctaataaggcagcaaacatg
aaagagttatgcaacgacctagaggctaaattgcagagttccgacgagaatttctccaaa
tccaattctctgttgtctcaagctttggaaaacaatgtggagctcgagcagaagttcaaa
gcacttgaagagcttcaccaggagtctcaacatgccaccactactgcacaccagaagatt
cttgagcttgaggagatgctgcaagcctccaatgctgctgcagaagatgtcaaaacacag
ttgagagaattagagacacgcttcattgcagcagagcaaagaaatgtggagctagaacat
cagctaaatcaggttgaacttaaaaggagtgatgctgagagagaactggaggagttctcg
gtgaaaatatctgaattaaatgcctctcttgaaaaggtagtggaagaaaagagtatcctg
aatgcccagattcaggagcaccaagacaagatagctcacatggagtctgactcaatcaaa
ctagcaacccgtaattcagaacttgaagaggaattgaagggcgttcaagctaaatgtgaa
gagcacgagggtagggccaatgtcaatgaccagcgcagccgtgaactttcggatttaatg
cagatttctcatacaaaagcagaggaatcagacaagaaggcaagtgagttagagctattg
cttgcaacagaaaaacacaggatccaggagcttgaagaacagataagtgcactagaaaat
aaatgtggtgatgcagaagcagagtctaaaaaactctctgaaaaggtatctgaacttgaa
gaagagcttacagcataccagaacaaagcatcaagctttgaaattgcattaaattcagcc
acagaaaaggagaaggaattgagtgaatgcttgaccgtggctgcagaagagaagaaaaac
ttggaggatgcctataaaaactcaactgaaaggttagctgaatcagagaatttgcttgaa
gtcttgcgcaatgaattaaatgatactcagcagaaactggagagcattgaaaatgatcta
aaggctgctggaatgaaagagagtgaagtaatggagaagcttaagtctgctgaggagcag
ttagaggaacaagggaaagtattggagcaagctacatcaagaagtgtagagctcgaatca
ctgcatgcagctctggcaagggattccgagctgacactccaagatgcaactgcaaaactt
gctagcagagattcagaggtagagtcattgaatgagaaattaaatactcttgaagatcaa
gttaagagttataaagagcagatagctgaagccactgaaagatctactgcagtgaaggat
gaactggaacaagttttgctgaagctttctttgtctgagagcaccaatgaagacttcaaa
aataaaatcttggaagcagagagtaaatctgcagaggtgctatccgaaaatgaactatta
actgagacaacaaatcagttaaataggaggattgctgatcttgaagaacagctaaattca
gtcagtgctgaaaaggaagctactattcaacagcttgcttctcatacaagcactatcact
gaattaacagagaaacattcaagagcctttgaagctcatgcagtgactgaagctcgcgtg
tcagaaacagaagtaaagttggaagaagcattacagaaattctgcgaaaaagatttagaa
gctaaggacttagctgagaagctacactctcttcaggatctggtgaaaagatatgaagat
caagtgcatgaaacttctgcccttgttgaaaatcaaaaagtggaactagaactgtctatt
tcgaatttgagagaccaagaaagaatcattgaagaactgaaaagtgcatcaggcaaactt
gaagaggagagaaaaggtctacttattgaaaattcagaaatttcagaaaaagtagcctct
tatgagctgaaattaaatgatttagaaaccaaatcatcagccgttattgctgagaagaat
gaagcagttgaagagctgaagaaggtgatagaagacttgacagagcaattaagttctgca
gggcaaaatcttgaagaggagagaaaaggtctttcagaaaaagtagcctcttatgagctg
aaactgaatgatttagaaaccaaatcatcagctgttattgccgagaggaatgaaacagtt
gaagggctgaagaaattgatagaagacttgacagagcaactaagttctgcagggaaaaat
cttgaagaggagagaaaagatcttcaagaaaaagtagcctcttatgagctgaaattaaat
gatttagaaaccaaatcatcagccgttattgctgagaagaatgaagcagttgaagggctg
aagaaagtgatagaagacttgacagagcaattaagttctgcagggcaaaatcttgaagag
gagagaaaatgtctttcagaaaaagtagcctcttatgagctgaaactaaatgatttagaa
accaaatcatcaactgttattgccgagaagaatacaacagttgaagggctgaagaaagtg
atagaagacttgacagagcaactaagttccgaggggcaaaatctacagacgcagctatcg
tcagctctggaggaaaagaaacaactccatgaaaagcatcaacattctgagaaagagctt
ctgagtcaaatagcacatcttgaagcacaacttcaagaacataaatcgagcaaagatgta
ctgcaatccaaagtagaggtcctcactgcggatatctctcagaaatctgagctgcagaat
cttgtgaaggagctcgaagaacaactagctagtgtcaagcttcaagtcaaagaacagaaa
gaagcagaatcccaaaaggagatgaaactagaagccacttttaaggagctgcaagctaag
agcaatgcagtaacactgttggaaagcaaagccaaagaactggaacagaaattgcagttg
gctgaagctcagttaaaagaaaaggaggagaaattgccattggagatgaaatccagggat
atcggatcaactgtctcagccgtatcgaaccggaagaaaaaatcgggagcatcttccggc
caggccgtgtcctcagattcaccgacagtacatgttcatggcaccgacgctgcctctcct
atgaagacactgaaacacatattgggcgtggcgttgatttccgtaatcaccggcatcatt
cttgggaaaagatactag
DBGET
integrated database retrieval system
