Ipomoea nil (Japanese morning glory): 109187810 Help Entry 109187810         CDS       T04663                                  Name (RefSeq) uncharacterized LOC109187810   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism ini  Ipomoea nil (Japanese morning glory) Pathway ini03018   RNA degradation Brite KEGG Orthology (KO) [BR:ini00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     109187810  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ini03019]     109187810 Messenger RNA biogenesis [BR:ini03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      109187810   mRNA degradation factors    5'-3' decay     Decapping complex      109187810 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  109187810 NCBI-ProteinID:  XP_019193695 LinkDB All DBs Position Un AA seq 819 aa AA seqDB search MERSSGKDLKDFTSSSSSVSDSALFDASQYAFFGRNVLEEVELGGLEDEEDSSSVPAGAG GVGGGLGDDDIQEYHLFEKDEGSMLGSLSDLDDLATTFSKLNRNVMGPRHPGVIGDRGSG SFSRESSSAAEWARDADFNEWFDQHLSDSECYQENKKWSSQPHLNSVHLAESKPLYRTSS YPHQPQIQQLQHCSSEPILVQKSSFTSFPPPGGRSQQASPRSLSHHYDLSSHGHQSPFSS ANLSSMSSSNMQLSSLPHRVHYNGNIPQLTSSGPSLNNRLQNHWANHPNPFHRDYSGLLN QVLPHQFPHQNGLLSHQLMSPQQQRLHLSVRPSLAHFSALQSQLYNSFPAPAHVGKHGMP DVRDSRSKSHKSRSVRFSQQGSDAASQKSESNAPQFRSKYMTGEEIESILKMQHAATHCN DPYVDDYYHQACIAKRAVESRSKLCFCPNKEQSSKSRNSAESVPHLHVDAEGRVSFSSIR RPLPLLEVHPPGFASTDGSGEQKTSDTPLEKEPMLAARITIEDGFHLLLEVDDIDRLLQF SQPQDSGTQLRRKRQMLLEGMAASLQLVDPLGKTNSSVGLNPKDDIVFLWLVSIPKGKKL ISRYLKLLIPGGELARIVCMAIFRHLRVLFGGLPSEQGASETISNLAKVVSKSVCGMDLN SLSACLVAVVCSSEQPPLRPLGSPAGDGATVILKSVLDRATYLLKDPQASHSYSMPNPAL WQASFDAFFGLLTKYCVSKYESIMQSIAQTQASTEMISPEAARAVSREMPVELLRSSLPH TNENQRKLLLNFAQRSMPVTGFNSHGGSSGQINPESVSC NT seq 2460 nt NT seq  +upstreamnt  +downstreamnt atggagagatccagcgggaaggatctcaaggacttcaccagctcctctagctccgtctct gatagtgcactgttcgatgcctcccagtacgcgttttttgggcgaaatgttcttgaggaa gttgaattagggggtttagaggatgaggaagatagtagtagtgtacctgctggtgctgga ggagtcggtggcggacttggcgatgacgatatacaggagtatcatttgtttgagaaagat gagggatcaatgttaggttcattatctgatttagatgacctagcaactacattttcaaag ttgaacagaaatgtcatgggcccaagacatcctggagttattggcgatcgtggatcagga tccttttctagggaaagttcatctgcagctgaatgggcaagagatgcagattttaatgaa tggtttgatcagcatttatctgatagtgaatgctaccaggaaaacaaaaaatggtcttct cagccacacctcaattcagtacatcttgcagagtctaaaccgctataccgaacgtcttct taccctcatcagccacagatccagcagctacaacactgctctagtgaaccaatattggta caaaaatcatctttcacttcctttcctcctcctggtggcagatcacagcaggcttcaccg cgcagtctttcccatcactatgatctgtcatcacatgggcatcagtcacccttctcttct gcaaatctctcttctatgtcaagctcaaacatgcagttatctagcctgccccacagggtc cactacaatggaaacataccacagttaacctcttctggtccatctctaaataaccggcta caaaaccattgggctaaccatccaaacccattccatagggattattctggccttttaaac caggttttgccacatcagttcccacatcagaatggtttattatcccatcagttgatgtct cctcaacagcaaagattgcacctttctgttcgaccttctttagcccatttttcagcactg cagtcccaattgtataattcttttcctgcacctgctcacgtgggtaaacatggaatgcct gatgtgagagattcaagatctaaatcacataaaagcagaagtgtgcggttttctcaacaa ggctctgatgcagctagccagaagagtgagagtaatgccccacagtttagatctaagtac atgactggtgaagaaatagaaagcattctcaaaatgcagcatgctgcaacacattgcaat gatccatatgtggatgattattaccaccaagcttgcatagcaaagagagctgttgagtct aggtcaaaactttgtttctgtccgaacaaggaacaatcttcaaagtcacgtaatagtgca gaatcagtgcctcatctccatgttgatgctgagggacgtgtttccttttcttccattcgt aggcccctacctcttcttgaagtccatccaccaggctttgcttctactgatggtagtggc gaacaaaaaacatctgacactccgttggagaaggaacctatgcttgcggctagaatcact atagaggatggtttccatcttctccttgaggtggatgacattgaccggcttcttcagttt agtcagccccaagacagtggtacccagctcagaaggaaacgacagatgctgttagaaggc atggcagcgtcacttcaacttgttgacccacttgggaaaaccaatagctctgttgggctg aatcctaaagatgacatcgtgttcttatggctagtatcaattcccaagggcaaaaagctg atttcaaggtaccttaaacttcttattcctggtggggagcttgccagaatagtttgcatg gcaattttccgccatttgagggttttatttggtgggcttccatctgagcaaggagcatct gagaccatttctaatcttgccaaagttgtgtcaaaatctgtttgtggaatggatcttaat tcactaagtgcttgtctagttgctgtagtttgttcctcagagcagccacctctgcgcccg cttggaagtcctgctggagatggagccactgtcatcttgaaatcagttcttgatagggca acttaccttttaaaagatcctcaggcctcacatagttatagcatgcctaacccagcccta tggcaggcatcttttgatgcctttttcggtcttcttacaaagtattgtgttagtaaatat gagagcataatgcagtccattgcacagacccaagcaagcacagagatgatcagtccagag gctgcaagggcagtgagcagagaaatgccagtagaactgttacgttctagccttccacac acaaatgagaaccaaaggaagttgctactgaattttgctcagcgttccatgcctgtaaca ggtttcaatagtcacggtggaagcagtgggcaaatcaatccggaatctgtgagctgttag

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