Ipomoea nil (Japanese morning glory): 109187835
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Entry
109187835 CDS
T04663
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
109187835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ini04040
]
109187835
Ion channels [BR:
ini04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109187835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
109187835
NCBI-ProteinID:
XP_019193732
LinkDB
All DBs
Position
Un
AA seq
677 aa
AA seq
DB search
MASEFERSRSNNFYDTDGVEEEDDDEEEEEESEDGGDEQEEKNLYNCRSIYGGACGGRRR
GGSVFGKVLDPRAAWVQEWNRVFLLVCATGLFVDPLFFYTLSISDNCMCLFVDGWFATTV
TVLRCMTDALYLWNMWLQFKINRRPHIMGARSRLHDNTPRAAAVRLLKATKGFLFDLFVI
LPMPQIVLWVAIPALLKKGLTTEVMTVLLIMFLFQYLPKIYHSVCILRRMQSLSGYIFST
VWWGIALNMIAYFVASHAVGACWYLLGIQRAARCFKEQCRMKSGCGLRMLACEEPIYYGT
TSVVKDMARLTWGNNAHVRAACLAEDNNFSYGAYRWTVQLVINENRLEKILFPIFWGLMT
LSTFGNLESTTDWLEVVFIIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNVEW
WMRRRSLPPEFRQRVRNYERQRWAAMRGVDECQMIRNLPEGLRRDIKYHLCLDLVRQVPL
FQHMDNLVLENICDRVKSLIFTKGETITREGDPVQRMLFIVRGHLQSSQVLREGVKSCCM
LGPGNFSGDELLSWCLRRPFVERLPPSSSSLVTLEATEAFGLEAKDVKYVTQHFRYTFVN
EKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPRSRSSSLGEDRLRL
YTALLTSPKPNQDDFDF
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgaatttgaacgttcacgaagcaataatttctacgacaccgatggtgtagaa
gaggaagacgacgatgaagaagaagaagaagaaagcgaagacgggggcgatgagcaagag
gagaaaaatttatacaactgccggagtatttacggcggcgcttgcggaggccgccgccga
gggggatctgttttcggcaaggtgttggaccctagagccgcatgggttcaggaatggaac
cgggtgttcctcctagtgtgcgccaccggcctattcgtcgacccgctcttcttctacact
ctctccataagcgacaactgcatgtgcctcttcgtcgacggctggttcgccaccaccgtc
accgttctccgctgcatgaccgacgccttatacctctggaacatgtggctgcagttcaag
attaatcgccggccacatatcatgggtgccaggagtagactacatgacaacacccctagg
gcggccgccgtacgactcttgaaggctaccaaggggttcctatttgatctttttgttatc
cttcccatgcctcagatagtgttgtgggtggcaatcccagcattgctgaagaaagggttg
acgacagaagtgatgacagttttgttaataatgtttctgttccaatacctcccgaagatc
taccactccgtctgcattctccggcggatgcagagtctctccggctacatcttcagcacc
gtctggtgggggatcgctctcaacatgatcgcatattttgttgcctcccacgcagtaggg
gcatgctggtatttgctgggtatccaacgagctgcaaggtgctttaaagaacagtgcagg
atgaaaagtgggtgtggtcttaggatgctggcttgtgaagagccaatatactatggaacc
acaagtgttgtgaaggacatggcacgtttgacgtggggtaacaatgcccacgtaagagca
gcttgtcttgccgaagataataatttttcttatggtgcatatagatggaccgtccaactt
gttataaatgaaaatcgtctggaaaaaatactttttcccatcttttggggcctcatgact
ctcagtactttcggtaatttggagagcacaacagattggctagaggtagttttcataatc
attgtgcttaccagtgggctccttcttgtcaccatgttgattggaaacatcaaggtgttt
ttgcatgcaacgacgtcaaagaaacaggcaatgcagttgaagatgaggaacgtagagtgg
tggatgaggaggcggtcgttgccgccggaattccggcagagagtgagaaactacgagcgg
cagcgctgggcggcaatgcgcggcgtagatgaatgtcaaatgatccgaaacctccctgaa
ggtcttaggagagacatcaaatatcatctgtgtttggacttggttagacaggtgcctcta
tttcaacatatggataatttggtcctggaaaacatatgtgacagggtgaaatcccttata
tttacgaagggagaaactataacaagagagggtgatccagtgcagagaatgttgtttata
gtaagaggtcatctccaaagcagccaagtactacgagaaggagtaaaaagttgctgcatg
ttaggcccgggaaacttcagcggcgacgagctcctctcatggtgtctccggcggcccttt
gtggagcggctaccgccgtcctcctccagcctagtgacgctggaagcgacggaggcattc
gggctggaagccaaagacgtgaagtacgtaacgcagcatttccggtacacatttgtgaac
gagaaagtgaagagaagcgcaaggtattactctcccgggtggagaacatgggcggcggtg
gcgattcagctggcctggaggagatacaggcaccgcctaacgctcacttcgctctccttc
ataaggcccaggagaccgcggtctagatcttcttctctcggagaagacaggctcaggctt
tatacagcgttgttgacatccccaaaacctaatcaggatgattttgacttctaa
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