Ipomoea nil (Japanese morning glory): 109188074 Help Entry 109188074         CDS       T04663                                  Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism ini  Ipomoea nil (Japanese morning glory) Pathway ini03013   Nucleocytoplasmic transport ini03040   Spliceosome Brite KEGG Orthology (KO) [BR:ini00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     109188074   09122 Translation    03013 Nucleocytoplasmic transport     109188074  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ini03019]     109188074    03041 Spliceosome [BR:ini03041]     109188074 Messenger RNA biogenesis [BR:ini03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      109188074 Spliceosome [BR:ini03041]  Complex C   Other components    EJC/TREX     109188074  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     109188074 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_EML_2 EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_NOL10_N Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_Vps41 DSE1_N eIF2A Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_EML NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 WD40_RFWD3 WD40_MABP1-WDR62_1st PAC11 Beta-prop_IFT80_2nd Tricorn_2nd TRM82_WD Beta-prop_NUP159_NUP214 Beta-prop_WDR41 TP_0598_N CFAP251_N B-prop_COPA_B_2nd Beta-prop_Nup120_160 WD_LRWD1 DUF7099 Beta-prop_WDR11_1st CNH Motif Other DBs NCBI-GeneID:  109188074 NCBI-ProteinID:  XP_019194118 LinkDB All DBs Position Un AA seq 313 aa AA seqDB search MAESIPFKNLHTREYQGHKKKVHSVAWNCNGTKLASGSVDQTARIWHIEPHGHGKAKDIE LKGHSDSVDQLCWDPKHAELIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGT HIAVGNREDELTILDVRKFKAMHKRKFNYEVNEIAWNMTGDMFFLTTGNGTVEVLSYPSL RPLDTLMAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFTKLEWPVRTISF NHTGEYIASASEDLFIDIANVQTGRSVHQIPCRAAMNSVEWNPKLNLLAHAGDDKNKYQA DEGVFRIFGFESA NT seq 942 nt NT seq  +upstreamnt  +downstreamnt atggcggaatcaatacccttcaaaaacctccataccagagaatatcaaggccacaagaag aaggttcattcagtagcatggaattgcaatggtacgaaactagcctcaggctccgttgat caaactgctcgcatatggcatattgagccccatggtcatggaaaggcaaaagatattgaa ctaaaaggccattcagacagtgtggaccaattatgttgggaccccaagcatgctgagttg attgcaacagcatcgggtgacaagacagttcgattgtgggatgctcgcagtggcaaatgc tcacagcaagttgaattaagtggggagaatatcaatatcacttataaacccgatgggact catatagctgttggcaacagggaagatgaactgacaatattggatgttcgcaagtttaag gctatgcataagcggaagttcaactatgaggtaaatgagattgcatggaatatgactgga gatatgttctttctgactactgggaatggaacggtggaggttctatcatatccttctctg cgccctcttgacacacttatggctcacactgctggttgttattgcattgcaattgaccca cttggaagatattttgctgttggaagtgctgattccttagtcagcctttgggatattaag gaaatgctctgtgttcgaacatttacaaaacttgaatggccagttaggacaataagtttc aatcatacaggagaatacattgcctctgcaagtgaggatttgttcatagatatagcaaat gttcagactgggcggtcagttcaccagattccctgtcgtgctgcaatgaacagtgtggag tggaacccaaagttaaacttgcttgctcatgctggagatgataaaaacaagtatcaagct gatgaaggtgtgtttcgtatatttggctttgagagtgcataa

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