Ipomoea nil (Japanese morning glory): 109188151 Help Entry 109188151         CDS       T04663                                  Name (RefSeq) uncharacterized LOC109188151   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism ini  Ipomoea nil (Japanese morning glory) Pathway ini03018   RNA degradation Brite KEGG Orthology (KO) [BR:ini00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     109188151  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ini03019]     109188151 Messenger RNA biogenesis [BR:ini03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      109188151   mRNA degradation factors    5'-3' decay     Decapping complex      109188151 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  109188151 NCBI-ProteinID:  XP_019194247 LinkDB All DBs Position Un AA seq 817 aa AA seqDB search MERSGEKDLKDFTDSSSSVSDSAMFDASQYAFFGRNVLEEVELGGLEDEEDSVPADGGVV GGRLGDEDIQEYHLFEKDEGSTLGSLSDIDDLATTFSKLNRVVTGPRHPGVIGDRGSGSF SRESSSAAEWARDADFNEWFDQHLSDSECYQENKKWSSQPHLNSVHLAESKPLYRTSSYP HQPQIQQLQHCSSEPILLQKSSFTSFPPPGGRSQQASPRSLSHHYDLSSHGHQSPFSSAD LSSMSSSNKQLSSLPHRVHYNGNIPQLTSSGPSLNNRLQNHWANHPNPFHRDYSGLLNNV LPHQFPHQNGLLSPQLMSPQQQRLHLSVQPSLAHFSALRSQLYNSFPAPAHLSKYGMPDA RDSRAKSHKSKSVRFSQQGSDAASQKSESNAPQFRSKYMTGEEIESILKMQHASSHCNDP YVDDYYHQACLAKRAVESRSKHRFCPNKEQSSRSRNSTESLPHLHVDAEGRVSFSSIRRP RPLLEVHPPGFSSADGSRDQKASDTPLEKEPMLAARITIEDGFHLLLEVDDIDRLLQFSQ PVDGGAQLRRRRQMLLEGMAASLQLVDPLGKTSSHVGLNPKDDIVFLWLVSIPKGKKLIS RYLKLLIPGGELARIVCMAIFRHLRVLFGGLPSEQGSSDTISNLAKIVSKSVCGMDLNSL SACLAAVVCSSEQPPLRPLGCPAGDGASLILKSVLDRATYLLKDPQASHSYSMPNPALWQ ASFDAFFGLLTKYCVSKYESIMQSIAQTQASTEMIGPEAARAVSREMPVELLRSSIPHTN ENQRKLLLNFAQRSMPVTGFNSHGGSSGQINPESVSC NT seq 2454 nt NT seq  +upstreamnt  +downstreamnt atggagagatccggcgagaaggatctaaaagacttcaccgactcctctagctccgtctct gatagtgcaatgttcgatgcatcccagtacgcgttttttgggcgaaatgttctggaggaa gtcgagttaggtggtttagaagatgaagaagatagtgtacctgctgatggtggagtagtt ggtggcaggcttggcgatgaagatatacaggagtatcatttgtttgagaaagatgaggga tcaacattaggttcattatctgatatagatgacctagcaactacattttcaaagttgaac agagttgtcactggcccgagacatcctggagttattggcgatcgtggatcaggatctttt tctagggaaagttcatctgcagctgaatgggcaagagatgcagattttaatgaatggttt gatcagcatttatctgatagtgaatgctaccaggaaaacaaaaaatggtcttctcagcca cacctcaattcagtacatcttgcagagtctaaaccactataccgaacgtcttcttaccct catcagccacagatccagcagctacaacactgctctagtgaaccaatattgttacaaaaa tcatctttcacttcctttcctcctcctggtggcagatcacagcaggcttcaccgcgcagt ctttcccatcactatgatctttcatcacatgggcatcagtcacccttctcttctgcagat ctctcttctatgtcaagctcaaacaagcagttatctagcctgccccacagggtccactac aatggaaacataccacagttaacctcttctggtccatctctaaataaccggctacaaaac cattgggctaaccatccaaaccccttccatagggattattctggccttttaaacaatgtt ttgccacatcagttcccacatcagaatggtttattatcccctcagttgatgtctccccaa cagcaaagattgcatctttctgttcaaccttctttggcccatttttctgcactgcgttcc caattgtataattcttttcctgcaccagctcacctgagtaaatatggaatgcctgatgcg agagattcaagagctaaatcacataaaagtaaaagtgtgcggttttctcaacaaggctct gatgcagctagccagaagagtgagagtaatgccccacagtttcgatccaagtatatgact ggtgaagaaatagaaagcattctcaaaatgcagcatgcttcatcacattgcaatgatcca tatgtagatgattattaccaccaagcttgcctggcaaagagagcagttgagtctaggtca aaacatcgtttctgtccgaacaaggaacaatcttcacggtcacgtaatagcacagaatca ttgcctcatctccatgttgatgctgagggacgtgtttccttttcttccattcgtaggccc cggcctcttcttgaagtccatccaccaggcttttcttctgctgatggtagtcgtgaccaa aaagcatctgacactcctttggagaaggaacctatgcttgcggctagaatcactatagag gatggtttccatcttctccttgaggtggatgatattgaccggcttcttcagtttagtcag cccgtagacggtggtgcccagctcagacggagacgacagatgctgctagaaggcatggca gcgtcactacaacttgttgacccacttgggaaaaccagtagccatgtcgggctgaatcct aaagatgacattgtgttcttatggctggtttcaattcccaaaggcaaaaagctgatttca aggtaccttaagcttcttattcctggtggggagcttgccagaatagtttgcatggcaatt tttcgccatttgagggtactatttggcgggcttccatctgagcaaggatcatctgacacc atttctaatcttgcgaaaattgtgtcaaaatctgtatgtggaatggatcttaattcacta agtgcttgtctagctgctgtagtctgttcctcagagcagcctcctctgcgcccgcttgga tgtcctgctggagatggagcctctttaatcttaaaatccgttcttgatagggcaacttac cttttaaaagatcctcaggcctcccatagctatagcatgcctaacccagccctatggcag gcatcttttgatgccttttttggtcttcttacaaagtattgtgttagtaaatatgagagc ataatgcaatccattgcacagacccaagcaagcacagagatgattggtccagaggctgca agggcggtgagcagagaaatgccagtagaacttttacgttctagcattccccacacaaat gagaaccaaaggaaattgctgctgaattttgctcagcgttccatgcctgtaactggattc aatagtcacggtggaagcagtggacagataaatccggaatctgtgagctgttag

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