Ipomoea nil (Japanese morning glory): 109188280
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Entry
109188280 CDS
T04663
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109188280
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
109188280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
109188280
NCBI-ProteinID:
XP_019194433
LinkDB
All DBs
Position
Un
AA seq
690 aa
AA seq
DB search
MDSYRPFQPPSQPAFAPPPPPNQNPLQPPPPASTAGQPRGNQPSQNWGYGNYQHAPPHFS
GPLPPRNHVPLPPPQSHQYPPPPPPPDSSYPPPPPPPQAAPPAPVYYPSSQYSQYNQHQH
LQPPPPPPPPSSPPPNSAIPPPPPPSSPPPPPSSAPPAHPSNESRPAAEKAAPKDGRDSG
WRESGHGNHGIPSKQKPPVPPMPVKKPNAPSGRVETEEERRLRKKREYEKQRHEEKHRHH
LKESQNKVLQKTQMLTSGVKGHGSISASHMADRRTAPLLSGERTENRLKKPTTFLCKLKF
RNELPDPTAQPKLMSLRRDKDRFTKYTITSLEKMHKPQLYVEPDLGIPLDLLDLSVYNPP
KGERTPLDLEDEALLRDDDPVTPIKKDGIKRKERPTDKGVSWLVKTQYISSLSLDSTKQS
LTEKQAKELRENKGGHNILENLNNRDRQIQEIKASFEACKSRPVHATNPRLQPLKVLPLF
PDFDRYKDQFVVATFDSAPTADAENYSKLDKAIRDKHESRAIMKSYVVRNSDAAKSDKFL
AYMVPSPNELEKDMFDENEDISYAWVREYHWDVRGDDTDDLTTFLVASGKSDARYMPVPT
KLSLRKKRAREGKSNEEVEQFPIPARVTVRNRQTVDVIELKDEGGYSSFKGSGSDSKRSR
MSLEDGLHSEKGMHDTDEDQSSGGEYELSD
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggattcttataggccattccagcccccgtcgcaacccgcgtttgctcctcccccaccg
ccgaatcagaatcctctgcaacctcccccgccagcatccaccgcagggcagccgcgaggg
aatcagccatctcagaattggggatacggtaattatcaacatgcaccgccgcattttagc
ggccctcttccgccgaggaatcatgttccgctgccgccaccccagtctcatcagtatccg
ccacccccgcctccgccggattcttcgtaccctcctccaccaccgccaccgcaagctgct
cccccagctccagtgtattatccttcttctcaatactcgcaatacaaccaacaccagcat
ttacaaccgccacccccacctcctccaccttcttctcctcccccaaattcagcaattcct
cctcctccgccaccttcttcacccccaccacccccttcatcagcccccccagcgcatcca
agtaatgaaagcaggcctgccgctgagaaagcagctcccaaggatggaagggattctggg
tggcgagaatcagggcatgggaatcacgggataccctctaagcagaaacctcctgttcct
cccatgccagtgaagaaaccgaatgctccttctggaagagttgagacagaggaagagagg
aggttgcggaagaagagagagtatgagaaacaaaggcatgaagagaaacataggcatcat
ttaaaagaatcccagaacaaggtgctgcagaagacccaaatgttaacttctggagtgaag
ggtcatggttccattagtgcatcacacatggccgacaggagaactgctcctttgttaagt
ggggagagaactgaaaatcggttgaagaagccaacaacatttctttgcaagctgaagttc
cgaaatgaattgccagatccaacagcacagccaaagcttatgtctttaagaagagacaaa
gatagatttaccaaatacacgatcacttcattagagaaaatgcacaagcctcaactatat
gttgaaccagatctcggaatccctcttgacctgcttgatctcagtgtatataaccccccc
aagggtgaaaggactcccctggatctcgaggatgaggccttgttgcgtgatgatgatcct
gtaacccctatcaagaaagatggcattaaaaggaaagagaggccaactgacaagggtgtt
tcttggctagtcaaaacacaatatatatcttctctaagcttggattcaacaaaacagtct
ctgactgaaaagcaagcgaaggaattacgagaaaataaaggaggccacaacattttagag
aaccttaataacagggatagacaaatacaagaaattaaggcttcttttgaggcatgcaag
tcacgacctgttcatgcaaccaatccaagattgcagcctcttaaagttttaccccttttc
ccagactttgatcggtacaaagaccagttcgtggttgctacatttgatagtgctcctact
gctgatgcagaaaactatagcaagttagacaaggctattcgagataaacatgaatctcgg
gcaattatgaaaagctatgtcgttagaaattcagatgctgctaaatctgataaatttctg
gcatatatggtcccttcacccaatgagctggagaaggatatgtttgatgaaaatgaggat
atctcgtatgcatgggttcgcgagtatcactgggatgtacgtggtgatgacacagatgat
ctaaccacattccttgtggccagtggcaaatcagatgcacgctacatgcctgttccaaca
aaactctcattgagaaaaaagagggccagagaaggaaaatcaaacgaagaagtagaacag
tttcccatacctgcaagagtgacagtaaggaatagacaaacagtagatgtcattgaattg
aaagatgaagggggttattcaagtttcaaggggagtggttcagattctaagagatcaaga
atgagcttagaagatggtttacattcagagaagggtatgcatgacacggatgaagaccaa
tctagcggcggtgaatacgagttatctgattga
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