Ipomoea nil (Japanese morning glory): 109188343
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Entry
109188343 CDS
T04663
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ini03016
]
109188343
Enzymes [BR:
ini01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
109188343
Transfer RNA biogenesis [BR:
ini03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
109188343
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
TYW3
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
TRM5-TYW2_MTfase
Kelch_1
Kelch_HCF
Beta-prop_TYW4
Kelch_2
Kelch_FKB95
TYW2_N_2
Beta-prop_Calicin
NANM
DUF6242_C
MTS
DNA_methylase
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
109188343
NCBI-ProteinID:
XP_019194522
LinkDB
All DBs
Position
Un
AA seq
1058 aa
AA seq
DB search
MEFEKRKAATLASINSPEPDKSPKGNIDAPILPLLAAINSHPSYFTTSSCSGRISIFAHP
TAPSNNPKKAKGGTWVFISHDPVDPDSVLPLLFGTELTQSPVSHSLVFRFEPLIIAIECR
DVEAAQSLVSLAISCGFRESGITSATNKRVIIAVRCSIRLEVPLGYSDRIMVSPEYLKYL
VELANEKMGANRKRTDGFLDALLKNRFLEPQISNGKLLGNNEVDSDERSGFLDGPESEFL
GNSSRDGMTSHKNDENTCGSSAVSGINPSEMPIAGESIERLFLWGHSASAMDDAFDKRVL
VFGGFGGPGRHTRRNDLLLLDLPIGKLEVVDVQETPSSRLGHTSSIVEKSMYVIGGRADP
LTILNDVWAFSIANKEWRLLQCSGSLFPPRHRHAAAVIGSKIYIFGGIHNDVILSSLHVL
DTQAMTWNELEVKGELPCPRHSHSMVANGTQLYIFGGYDGERPLGDLYSFDTKTLLWKKE
NMSGRPPSARFSHSMFVYKNFLGIIGGCPVSQSYHQLSLIDLRLRQWKHVVVSFLGKGLL
VRSTANVVGDDLIMIGGGAACYAFGTRFSEPMKINLLSLISEVDNSINSDHMNRSVDYQQ
GEGIETKKTNSSVFSQKGVEMGQDGGMDKSADPRESGENDGKHIVASCWVVRLERKYAKL
VKDILKNFGWLDLGRKVYSQDDGMHICFPVTENFCSIFPDKRPGLGDDIKESDDFDSSKP
FLEREHLLKDISSSTALKVLMECHATKIEDEVLKVKKATHTPLEIMKEAVASLISQRGLP
PQLLEQLPSRWERLGDIVVLPITCFKDPEWDSIGEELWCAVAKSLGARRLARQGRVSPTG
TRDSTLEILVGDNGWVDHRENGILYSFDTSKCMFSWGNLSEKLRMARLDCTNEVIVDLFA
GIGYFVLPFLVRANAKMVYACEWNPLAIEALRHNLHANLVADRCVVLEGDNRITAPKGVA
HRVCLGLLPTSEGSWVTAVRALREEGGIMHIHENVKDSEEASWTQYVSRSIQEIAQSEGR
AWEVSVEHVERVKWYAPHIRHLVVDLRCRSNDETPQVT
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgagaagaggaaagctgccactttagcttcaatcaactcgccggaaccggac
aagtctccgaaaggcaacatagacgccccaatcctgccactactcgccgccatcaactct
cacccttcatatttcaccaccagctcttgctccggccgcatctccatctttgcccacccc
accgccccttcaaataaccccaagaaggccaaaggagggacatgggtctttatctcccac
gacccagttgatcccgactccgttttaccactcctatttgggaccgagttgactcagtct
cctgtctcccacagcctggtgttcaggtttgagcctctgattatcgccattgagtgtaga
gacgtggaggcagctcagtcgctggtttccttggcgatttcgtgtgggtttagggagagt
gggattactagtgccactaacaagagagtgatcattgctgtaaggtgctcgattcgattg
gaggtgccgctgggatatagcgacaggataatggtgtcgccggaatacttgaagtacctc
gttgagcttgcaaatgagaagatgggcgctaacaggaagagaactgatggctttcttgat
gcactgttaaaaaatagatttttagagcctcagattagtaatggaaagcttttgggcaat
aatgaagtggattctgatgaacgttcaggttttctcgatggacccgagtcagagttcttg
ggaaattcttccagagatggcatgactagccataagaatgatgaaaatacatgcggatca
tcagcagtttctggtatcaacccatcggagatgccaattgccggagagtccattgaaagg
cttttcctctggggtcactctgcttctgcaatggatgatgcatttgacaagagggttctc
gtttttggtgggtttggaggtccaggtagacatacacggagaaatgatctgctacttctt
gatctaccaattggcaagttagaagtagttgatgttcaggaaaccccatcatctcgtttg
ggtcatacatcttccatagtagaaaagagtatgtatgtaattggtggaagagctgaccca
ttaactattctgaatgatgtgtgggcttttagcattgccaacaaggagtggagactttta
caatgttctggaagtttattcccgccaaggcatcggcatgcagcagcagtgattggctca
aaaatatatatatttggaggaattcataatgatgtaatattgtcgtcactacatgtcctt
gacacacaagccatgacatggaatgaactagaagttaaaggggaattgccatgtccccgt
cactctcactccatggtagcaaatgggactcaattatatatttttgggggatatgatggg
gagagacctcttggagatctttatagttttgatactaaaacacttctttggaagaaggaa
aatatgtctgggagaccaccaagtgcaaggttttcccactctatgttcgtctataagaac
tttcttggtattattggaggatgtcctgttagtcaaagttatcatcagttgtcattgatt
gatttgcgcttaaggcagtggaagcatgttgtcgtcagtttcttaggcaagggcttgtta
gttcgcagcacagctaacgttgttggtgatgacttaataatgattggtggtggggcagca
tgttatgcattcggtactaggttcagtgaaccaatgaaaataaacttgctttctttgatc
tctgaagttgataattctatcaattcagaccatatgaataggtctgtcgattatcagcag
ggagagggaatagaaaccaagaaaactaattcatcggtgttctcccagaagggagttgaa
atgggtcaagatggaggtatggataaaagtgctgaccctagagaatctggtgaaaatgac
ggaaaacatattgttgcctcctgttgggttgtaagactagaaagaaaatatgcaaaactg
gtgaaagatattttaaaaaattttgggtggttggatcttggaagaaaagtttactcccag
gatgatggaatgcatatatgttttcctgtaacagaaaatttttgctcaatattccctgat
aagagacccggcttaggtgatgacattaaagaatcggatgattttgattcttcaaaacca
tttcttgaaagggaacatcttttaaaagacatttccagttcaacagccttgaaagttctg
atggaatgtcatgcaacaaaaattgaagatgaagttctaaaagtgaaaaaggccacacac
actcccttggaaataatgaaggaagctgtagcctctttaatcagtcaaagaggactgccg
ccacaactcttagagcaactaccatcaagatgggagcgattaggtgatattgtggtactt
cctatcacatgcttcaaggatccagaatgggactctattggggaggagctttggtgtgct
gttgcaaagtcacttggagctcgtaggcttgctcgacaaggcagagtttctccaactggc
acgagagatagtactttggagatccttgttggagataatggctgggtagatcaccgtgaa
aatggaattttatattctttcgatactagcaagtgcatgttctcgtggggtaatctctct
gagaagctgagaatggctcgccttgactgtacaaatgaagttatagtggatctatttgct
ggtattggatattttgtgttgccattccttgtgagggctaatgccaagatggtctacgct
tgtgaatggaaccccctggctattgaggctctccgtcacaatcttcatgctaatcttgta
gctgaccgatgtgtagtacttgaaggagataatcgaattacagcaccaaaaggtgttgct
catcgtgtctgccttgggctcctgccaacgagcgagggcagttgggtcactgcggtgaga
gcattaagagaggaaggtggaataatgcacatccatgagaatgtgaaggattcagaagaa
gcctcgtggacgcagtatgtttcacggtcaatccaagagatcgcccaatctgaaggccgc
gcctgggaggtatcagtagaacacgtggagagagtgaaatggtacgctccacacattcgc
cacctcgttgtagatttaagatgcagatccaatgatgaaacgccacaagttacttga
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