Ipomoea nil (Japanese morning glory): 109188613
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Entry
109188613 CDS
T04663
Name
(RefSeq) uncharacterized LOC109188613
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109188613
Enzymes [BR:
ini01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109188613
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109188613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_11
zf-C3HC4_2
G7C_C
zf-RING_16
RINGv
B12-binding
zf-UDP
zf-RING_Vps41
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
109188613
NCBI-ProteinID:
XP_019194789
LinkDB
All DBs
Position
Un
AA seq
648 aa
AA seq
DB search
MVGGENENAKTICSICFEDLKPIVEDLQSISICGHVFHELCLQQWFEYCKNGKKTCPVCK
QACKEKNVGRLYFQSVGETTEASFTQKLRDCDQNPEELRREVKRLQGRVFGLDSALEKHH
KDLKDVTEELLACKEQVKIEVTLKNEALKQSGMAQSLLYVKSKDLERSNSECTRLQERNL
LLAKELAALKLVCDLNLEEEDVLKFASLGNEANSKETIDVLKRSLVIRNKSYKELMVKCN
SLGRGEARCLSKLEKAKAKITKLKVRVQELETAVEAKENEALRTLRTSKRTFEVDAAEAF
GAQPKFKRCSYEDQNKGHLESRVDLDQGNNIHTDLLCSRKKEKLKVKDSTRRVPSEDTVA
CSLQENREFSFLKDKDIHETSTRGNEGLYENLMPATSNKTTLLDCHLSTVNASMRTISGI
QVPQVENKEEMTSSRNSIKNSKYVLPETNDANDDDLVLLGDTTLAQPSFRKRKETPSILA
EPDFSLAAEKEITPSSRSSNENNKYILPKTNGANDDDLVVLGDTTLAQPAFHIRKETSSS
ILAEPGDHCFSGGLLGPDGSNWHLGKWCKKGSTPASQGSATVAGDLIAVGADGRGGRVKV
LRSSNHKALDNNNNASASAKRIKNGVKASSMQSQGCLQIEHFFSRAGQ
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggtcggaggcgagaatgagaacgcgaagaccatttgctcaatttgcttcgaagatctt
aaacctattgtcgaagatctccaatcgatttctatctgtggtcacgtctttcacgagctc
tgtcttcagcaatggttcgaatattgcaagaatggaaagaagacttgtcctgtatgcaaa
caggcctgtaaggagaagaatgtgggccggctttattttcagtcagttggtgaaaccact
gaagcaagcttcacccagaaactgcgtgactgtgaccagaatccagaagagttgcggaga
gaggtcaagagattgcaggggagagttttcggactggattctgctctggagaaacaccat
aaagatctcaaagatgttactgaagagctgttagcatgcaaggaacaggtcaagattgaa
gtgacactgaaaaatgaggctctgaaacagagtggtatggctcagagcttgctttatgtg
aaatctaaggacctggaaaggtcaaattcagaatgcacaaggctgcaggaaaggaacctc
ttactggccaaggaacttgcagcactcaagttggtctgtgatttgaacttggaggaagaa
gatgtcctaaagtttgcttcattaggtaatgaggccaacagtaaagagacaattgatgtc
ttgaaaaggtcattggtcatccgtaacaagagttacaaagaattgatggtgaagtgcaat
tctcttggaagaggagaagcgcgttgtcttagtaaacttgagaaggccaaagccaagata
actaaactgaaagtaagggttcaggaactcgagacagctgttgaagcaaaagaaaatgaa
gcgttgagaactttaaggacttccaagaggacttttgaggtagatgcagctgaagctttt
ggtgcacaacccaaatttaagaggtgctcatatgaggatcaaaataagggccatcttgag
tcaagggttgatttggatcaaggcaataacatccatactgatttactttgttcaagaaag
aaggaaaaattgaaagtgaaggatagtacaagaagagttccaagtgaagatactgttgcc
tgcagtctgcaagagaatcgggaattttcttttcttaaagataaagatatacatgagact
tctactcgtgggaatgaaggcttgtacgaaaacttgatgcccgcaactagtaacaaaaca
actctccttgattgccatttgtcaacagtaaatgcttccatgaggacaataagtgggatt
caagtgccacaagtagaaaacaaggaagaaatgacaagctcaaggaattccattaagaac
agtaaatacgtattacctgaaacaaatgatgccaatgatgatgatttggtgcttttaggt
gacacaactctagctcaaccctcttttcgcaaaagaaaagagactccgtccatccttgcc
gaaccagatttttcactagctgcagaaaaggaaataactccaagctcaaggagttctaat
gagaacaataaatacatattacctaaaacaaatggtgccaatgatgatgatttggtggtt
ttaggtgacacaactctagctcaacccgcatttcacataagaaaggagacttcttcgtca
atccttgctgaaccaggggaccattgcttctctggtgggttgctaggtcctgatggaagc
aattggcacttagggaaatggtgcaagaagggatcaacaccagcgtcccaaggatccgct
actgttgctggtgatttgattgctgttggagcagatggtagaggtggtagggtcaaagtt
ctacgatcctcgaaccacaaggccttggataataacaacaatgcatcagcttcagcaaag
agaatcaagaatggagtgaaagcaagtagtatgcagtctcaagggtgcttgcagatagaa
cacttctttagtagggctggccaataa
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