Ipomoea nil (Japanese morning glory): 109188925
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Entry
109188925 CDS
T04663
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109188925
Transcription machinery [BR:
ini03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
109188925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
DUF1664
Motif
Other DBs
NCBI-GeneID:
109188925
NCBI-ProteinID:
XP_019195122
LinkDB
All DBs
Position
Un
AA seq
513 aa
AA seq
DB search
MGVVTVSSSAARSLRGFNNRFSARLCPLKGPFILSFKTDKTKNAALVSPKESESLLIQYS
KDDEKRLGQASSKLSAGRVCGVISTDEASPSTIELDYNEAAAKLEKLYKSSPETGDRTVK
RGRGRRKRIGEGNEEAEKENIIRNPKKKAKRLSLDKRITLRRKKEGELLVASISQKQQHR
EATTNDEKIDMLVREYSIGTNLVTLDWKKMKIPPVLSSSEHSWLFKLMQPMKAIFQVKEN
LQNDLGREPTDVEIAEATNIDVVQLRKTLEVGQAARNKLIKHNLRLVMFVVNKYFQDFAS
SPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSITLSSFTKVSFGLES
VRAEIQKAKMELLVKLQRMPTENEVTERVGISRERYHEVMKVSKPVLSLNAKHKTTQEEL
IDGITDVDDVEGDKRKHPALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGN
LNISREMVRKHEVKALMKLKHPARVDYLRRYIF
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttccagctctgctgcgcgtagtctcagaggattcaacaacaga
ttttctgctcgtttatgcccgcttaaaggaccattcatattatcattcaaaaccgataag
accaaaaatgcagccttagtttctccaaaagaatctgaatctttacttatacagtattca
aaagacgatgaaaagaggcttggacaagcctcgtcgaagctttctgcaggtagagtgtgt
ggcgttatctccaccgatgaagcctccccgagcaccatagaattggattacaatgaagct
gctgcgaaactggagaaactgtacaagtctagtccagaaactggagatcgtactgtgaag
agaggccgaggaaggagaaagaggattggagaaggcaatgaagaagcggagaaagaaaac
attataaggaacccgaagaagaaggctaagcgattgagtcttgataagaggattacgctg
agaaggaaaaaggaaggcgaattgttggttgcttcgatatcccagaaacaacagcacagg
gaggcaactactaatgatgaaaagatcgatatgcttgttagagaatactctatcggtaca
aatttagtgaccttagactggaagaagatgaaaattccaccagtcctttcatcatctgag
cattcctggctctttaaactaatgcagcctatgaaggcaatctttcaagttaaggaaaat
ctgcaaaacgatcttggacgagaaccaactgatgtcgaaatagctgaagcaacaaatata
gatgtcgttcagctaaggaaaacattagaagtcgggcaagctgcaagaaacaaattgatc
aagcacaatctgcgccttgttatgtttgtcgtcaacaaatattttcaagactttgctagt
agtccgaggttccaagacctgtgccaagcaggcgtgaagggccttataacagccattgat
cgatttgaacccaaaaggaagttccgcctctcaacatatggcctgttttggatcagacac
gcaattatacgctccatcactctctccagcttcactaaggtctcctttggacttgaatcg
gtgagagcggaaattcagaaggcgaaaatggagctgctggtgaagctacaaaggatgcca
acagagaatgaggtgacagaaagagttggaatctcccgggagagatatcacgaagttatg
aaagtttcgaagcccgtcttatccctcaatgcaaagcacaagacaacgcaggaagagctc
atcgacggcatcactgatgtggatgatgttgaaggcgataagcgcaagcatcccgctctt
ctcagactcgccctcgatgatgtgcttgattctctgaagccgaaagaaagtctggtgatg
agacaaagatacggtcttgatggaaagggcgacagaacgctgggagaaattgcaggaaat
ttaaacatttcgagagagatggttaggaagcatgaagtgaaggctctgatgaagcttaag
catcctgctcgagtggattaccttcgcagatacattttctaa
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