KEGG   Ipomoea nil (Japanese morning glory): 109189214
Entry
109189214         CDS       T04663                                 
Name
(RefSeq) DNA-repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109189214
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ini03400]
    109189214
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     109189214
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5
Other DBs
NCBI-GeneID: 109189214
NCBI-ProteinID: XP_019195567
LinkDB
Position
Un
AA seq 369 aa
MSQAGRDRDSSRNGRKRNLPSWMGSRKDASNVDGNKRAHAGDQEGSEEGETSKVSKNHSK
IQNAEVETEPNSDLGTSNFSKLMEGVVFVLSGFINPERSTLRSQALEMGAEFQPDWNSNC
TLLVCAFHNTPKFRQVEADLGTIVSKDWIAECYNQRQLIGIEPYLMHAGKPWRKQSVCKD
QRPSTSRKSQKRVESSRSDMSTPASSKDTHSNGVKECFSPSKVKKWAIDDLQSTISWLES
QDEKPEPTEIKKIAAEGILTCLQDTIDSLKQGQDVKRITEEWACIPRAVEELAKFQGTKS
RLTMVQKEDLCKQAVSCKQIYEREFKNKDLFLKMKEPNTGSDSDETIEMTEQEIDQAYNA
VSSTLQTVN
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgtcacaggcaggcagagatagagacagtagtaggaatggaagaaaacggaatcttccc
tcgtggatggggtcaaggaaagatgcaagtaatgttgatgggaataaacgagctcatgct
ggtgatcaagaaggaagtgaggaaggtgagacctctaaagtgtcgaaaaaccacagcaaa
atacagaatgctgaagttgaaactgaaccaaactctgatttgggtacctcaaacttctcg
aaattaatggagggtgtcgtatttgttctatcaggctttattaatcctgaacgaagtaca
ctgaggtctcaggcattagagatgggagctgagtttcaacctgattggaattcaaattgc
acccttttggtctgtgcatttcacaacactccaaagttccggcaagttgaggcagatctt
ggaactattgtatccaaggattggatagcagaatgttataaccaacggcagctcattggc
atcgaaccttaccttatgcatgctgggaaaccatggaggaagcaaagtgtttgcaaagat
caaaggccatccacttcaagaaaatctcaaaaaagagtagaaagctctcgctcagacatg
agtacacctgcatcatctaaggatacacattccaatggtgtcaaagaatgtttctctcct
tctaaagtaaaaaaatgggccattgatgatcttcagagtactatttcatggctagaaagt
caagacgagaagccagagccaacagagattaagaaaatagctgctgaaggcatcttaacc
tgtttacaggatacaatagattctctgaagcaagggcaggatgtaaaaagaataaccgag
gagtgggcatgcatccctcgtgcagttgaggagttggcaaagtttcaaggcactaaaagc
aggttaactatggtacagaaggaagatctttgtaaacaagctgtatcctgtaaacaaatt
tacgagcgagaattcaagaacaaagatctgttcctcaaaatgaaagaaccaaacacaggt
tctgacagtgatgaaacaatcgagatgacagagcaggaaattgatcaagcttataatgct
gtgtcttctacattgcaaactgttaattag

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